RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 STAG3L1P0CL83 205 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 FGFR4P22455 802 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 CTNNB1P35222 781 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 GATMP50440 423 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 GPC3P51654 580 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 GRB10Q13322 594 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 BTG3Q14201 252 aaPredicted RBP9.41□□□□□ -0.9
USP16-202ENST00000399973 EMC2Q15006 297 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 OTUD6AQ7L8S5 288 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 NPAS4Q8IUM7 802 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 FIBCD1Q8N539 461 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 RNF169Q8NCN4 708 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 NEK9Q8TD19 979 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
USP16-202ENST00000399973 ADAM2Q99965 735 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 JPH2Q9BR39 696 aaPredicted RBP9.41□□□□□ -0.9
USP16-202ENST00000399973 BACH2Q9BYV9 841 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 TMX1Q9H3N1 280 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 ZSWIM4Q9H7M6 989 aa9.41□□□□□ -0.9
USP16-202ENST00000399973 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
USP16-202ENST00000399973 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
USP16-202ENST00000399973 A0A087WZ62 844 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 VPS37CA5D8V6 355 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 ZBTB39O15060 712 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 MAFO75444 373 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 CSDE1O75534 798 aaKnown RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 RFC5P40937 340 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 TECP42680 631 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 ERVK-21P61565 698 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 RTN4RL1Q86UN2 441 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 KSR1Q8IVT5 923 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 TMEM143Q96AN5 459 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 MTMR9Q96QG7 549 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 FDXACB1Q9BRP7 624 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 GCOM2Q9BZD3 368 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 PRDM6Q9NQX0 595 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 SSUH2Q9Y2M2 353 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
USP16-202ENST00000399973 COL4A3BPQ9Y5P4 624 aa9.4□□□□□ -0.9
USP16-202ENST00000399973 EYSQ5T1H1 3165 aa9.4□□□□□ -0.91
USP16-202ENST00000399973 MYH11P35749 1972 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 A0A087WWV3 80 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 USO1O60763 962 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 DGKIO75912 1065 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 SLITRK3O94933 977 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 DARSP14868 501 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 ZSCAN20P17040 1043 aaPredicted RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP16-202ENST00000399973 EIF4BP23588 611 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 SARSP49591 514 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 GPM6BQ13491 265 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 SPOUT1Q5T280 376 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 TMEM192Q8IY95 271 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 ERMNQ8TAM6 284 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 PIGOQ8TEQ8 1089 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 TCP11Q8WWU5 503 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 PSPC1Q8WXF1 523 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 SAMD11Q96NU1 681 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 MTRQ99707 1265 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 RGS18Q9NS28 235 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 THEGQ9P2T0 379 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 PIN4Q9Y237 131 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 PCDHB7Q9Y5E2 793 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 PCDHB6Q9Y5E3 794 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 MTCH2Q9Y6C9 303 aa9.39□□□□□ -0.91
USP16-202ENST00000399973 MRPL42Q9Y6G3 142 aaKnown RBP9.39□□□□□ -0.91
USP16-202ENST00000399973 IGKV6-21A0A0C4DH24 114 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 TBKBP1A7MCY6 615 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 MED24O75448 989 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 SRGAP2CP0DJJ0 459 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 FGFR1P11362 822 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 U2AF2P26368 475 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP16-202ENST00000399973 CCT6AP40227 531 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 PTGDRQ13258 359 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 HAUS3Q68CZ6 603 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 SLC24A5Q71RS6 500 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 MAEAQ7L5Y9 396 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 CATSPER4Q7RTX7 472 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 ZNF410Q86VK4 478 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 EXOC8Q8IYI6 725 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 CMTR2Q8IYT2 770 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 ABI1Q8IZP0 508 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 PRPF31Q8WWY3 499 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 DHX33Q9H6R0 707 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 ATP6V0A4Q9HBG4 840 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms