RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 RASA4O43374 803 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 JAK3P52333 1124 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 AARS2Q5JTZ9 985 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 EML4Q9HC35 981 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 COPG1Q9Y678 874 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 FGGP02679 453 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 GPC3P51654 580 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PTPN21Q16825 1174 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 GIMAP4Q9NUV9 329 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ADORA1P30542 326 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ICA1LQ8NDH6 482 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 NDFIP2Q9NV92 336 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PHKG2P15735 406 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 CCNE1P24864 410 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 EAF2Q96CJ1 260 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 TRIM54Q9BYV2 358 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PEX3P56589 373 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 TOGARAM2Q6ZUX3 1019 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PJA2O43164 708 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PSMC1P62191 440 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 ZMYM1Q5SVZ6 1142 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PAGE5Q96GU1 130 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 NDE1Q9NXR1 346 aa13.12□□□□□ -0.31
CACNA1C-219ENST00000399649 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 PDE8BO95263 885 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 CALB1P05937 261 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 STXBP2Q15833 593 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 GOLGA8MH3BSY2 632 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DNAJC6O75061 913 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TFDP2Q14188 446 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DBNLQ9UJU6 430 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 UBE4BO95155 1302 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 HUS1O60921 280 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 CHGBP05060 677 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 AP1B1Q10567 949 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TAS2R42Q7RTR8 314 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TEX9Q8N6V9 391 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 PPHLN1Q8NEY8 458 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 CCDC188H7C350 402 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DMTNQ08495 405 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DDIASQ8IXT1 998 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 CASP8Q14790 479 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 DYRK4Q9NR20 520 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 ADAM22Q9P0K1 906 aa13.11□□□□□ -0.31
CACNA1C-219ENST00000399649 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 DIAPH2O60879 1101 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 ANO5Q75V66 913 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 CCNYL1Q8N7R7 359 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 TSSK1BQ9BXA7 367 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 APOA1P02647 267 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 DYNC1I2Q13409 638 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms