RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 STAT6P42226 847 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CCL23P55773 120 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 LRRC8DQ7L1W4 858 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TET1Q8NFU7 2136 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DHX58Q96C10 678 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PPP1R16BQ96T49 567 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ADAMTS10Q9H324 1103 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MYMKA6NI61 221 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RSPH10B2B2RC85 870 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 NBNO60934 754 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GABBR2O75899 941 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 IQCF3P0C7M6 154 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RSPH10BP0C881 870 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SELPP16109 830 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GPC3P51654 580 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 BFSP2Q13515 415 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MAEAQ7L5Y9 396 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RETREG2Q8NC44 543 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 BADQ92934 168 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CCDC43Q96MW1 224 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SUCLA2Q9P2R7 463 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SERTAD1Q9UHV2 236 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CEP290O15078 2479 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 HIP1RO75146 1068 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RAG1P15918 1043 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 LIG1P18858 919 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GLRA2P23416 452 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TMOD1P28289 359 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 EPHB4P54760 987 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MLLT1Q03111 559 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CAPSQ13938 189 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 IER5Q5VY09 327 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 NME8Q8N427 588 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MCPH1Q8NEM0 835 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 STAMQ92783 540 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DNAJC19Q96DA6 116 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 REEP2Q9BRK0 252 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CELF4Q9BZC1 486 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
HLA-DQB1-203ENST00000399082 A0A087WZ62 844 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 H0YGN5 161 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CSF2RAP15509 400 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CASP1P29466 404 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SYKP43405 635 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 LAMTOR4Q0VGL1 99 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GIT2Q14161 759 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FBXO47Q5MNV8 452 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ADGRA3Q8IWK6 1321 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MAP7D2Q96T17 732 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 OSMRQ99650 979 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 AGO3Q9H9G7 860 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KCND2Q9NZV8 630 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MYH11P35749 1972 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NR1I2O75469 434 aa13.76□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZNF202O95125 648 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms