RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 LINC00301Q8NCQ3 95 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 TCP11Q8WWU5 503 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 CDK5RAP3Q96JB5 506 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 PNMA5Q96PV4 448 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 CSRNP2Q9H175 543 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 BHMT2Q9H2M3 363 aa23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 NOC2LQ9Y3T9 749 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 SRPRBQ9Y5M8 271 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-206ENST00000397408 E9PMD0 336 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 EFCAB14O75071 495 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 RPS6KA5O75582 802 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 YEATS4O95619 227 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 UBA7P41226 1012 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 GRB10Q13322 594 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 PADI6Q6TGC4 694 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 KCNK18Q7Z418 384 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 KSR1Q8IVT5 923 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 NLRP4Q96MN2 994 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 CLIC6Q96NY7 704 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 PLIN2Q99541 437 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 NT5C3AQ9H0P0 336 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 PADI3Q9ULW8 664 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 DNM3Q9UQ16 869 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 COL4A3BPQ9Y5P4 624 aa23.58■■□□□ 1.36
TSPAN4-206ENST00000397408 ATP2A2P16615 1042 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 DEFB103AP81534 67 aa23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 CDC42EP1Q00587 391 aa23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 DNM1Q05193 864 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 SPECC1Q5M775 1068 aa23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 KRI1Q8N9T8 703 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 PRPF31Q8WWY3 499 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 LRCH3Q96II8 777 aa23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 SLC9A7Q96T83 725 aa23.57■■□□□ 1.36
TSPAN4-206ENST00000397408 A0A087WZ62 844 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 GRXCR1A8MXD5 290 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 SPTLC2O15270 562 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 SLC26A4O43511 780 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 EYA4O95677 639 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 DARSP14868 501 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 FXR1P51114 621 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 NFX1Q12986 1120 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 TMEM119Q4V9L6 283 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 MAEAQ7L5Y9 396 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 ZNF410Q86VK4 478 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 FAM228AQ86W67 206 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 MCPH1Q8NEM0 835 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 RASSF8Q8NHQ8 419 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 CALML4Q96GE6 196 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 FDXACB1Q9BRP7 624 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 ERVK-5Q9HDB9 667 aa23.56■■□□□ 1.36
TSPAN4-206ENST00000397408 EIF4BP23588 611 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 ANP32AP39687 249 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 SMAD3P84022 425 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 LAMTOR4Q0VGL1 99 aa23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 ATL3Q6DD88 541 aa23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 GCOM2Q9BZD3 368 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 POLR3FQ9H1D9 316 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 GPRC5CQ9NQ84 441 aa23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 ST3GAL5Q9UNP4 418 aa23.55■■□□□ 1.36
TSPAN4-206ENST00000397408 GPR182O15218 404 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 CYP11B2P19099 503 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 KARSQ15046 597 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 ODR4Q5SWX8 454 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 USP49Q70CQ1 688 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 ASAP3Q8TDY4 903 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 SYMPKQ92797 1274 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 EPSTI1Q96J88 318 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 CCSER1Q9C0I3 900 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 CFAP45Q9UL16 551 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 PTPRSQ13332 1948 aa23.54■■□□□ 1.36
TSPAN4-206ENST00000397408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 PPP6R2O75170 966 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 AMHP03971 560 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 SRGAP2CP0DJJ0 459 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 PLCG1P19174 1290 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 ARL2P36404 184 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 MXD4Q14582 209 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 FAM102BQ5T8I3 360 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 TMCO2Q7Z6W1 182 aaPredicted RBP23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 MYOCDQ8IZQ8 938 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 KCTD17Q8N5Z5 321 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 RNF149Q8NC42 400 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 PHOSPHO2Q8TCD6 241 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 LINC01599Q8WXQ3 324 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 FTHL17Q9BXU8 183 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 TMX1Q9H3N1 280 aa23.53■■□□□ 1.36
TSPAN4-206ENST00000397408 ASAP2O43150 1006 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 CSDE1O75534 798 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 SSBP05455 408 aaKnown RBP eCLIP23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 FGFR4P22455 802 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 DDIT3P35638 169 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 TXLNAP40222 546 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 RABGGTBP53611 331 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 HERC6Q8IVU3 1022 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 KCNG4Q8TDN1 519 aa23.52■■□□□ 1.36
TSPAN4-206ENST00000397408 NCLP19338 710 aaKnown RBP23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 GLRA2P23416 452 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms