RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HOXA2O43364 376 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 STBD1O95210 358 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 LYPLA2O95372 231 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 YWHABP31946 246 aaKnown RBP15.6■□□□□ 0.09
SEC13-204ENST00000397099 GPC3P51654 580 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 SPIRE1Q08AE8 756 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 BTG3Q14201 252 aaPredicted RBP15.6■□□□□ 0.09
SEC13-204ENST00000397099 EPC2Q52LR7 807 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 NAALADL2Q58DX5 795 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 NCAPH2Q6IBW4 605 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 NOSTRINQ8IVI9 506 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 TMEM192Q8IY95 271 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 CRIPAKQ8N1N5 446 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 LRRC71Q8N4P6 559 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 NLRP7Q8WX94 980 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 CEP170P1Q96L14 293 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 TBC1D32Q96NH3 1257 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 MTMR9Q96QG7 549 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 C11orf84Q9BUA3 381 aaPredicted RBP15.6■□□□□ 0.09
SEC13-204ENST00000397099 PLVAPQ9BX97 442 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 LMAN2LQ9H0V9 348 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 RC3H2Q9HBD1 1191 aaKnown RBP15.6■□□□□ 0.09
SEC13-204ENST00000397099 CHST12Q9NRB3 414 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 DACT1Q9NYF0 836 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 STK24Q9Y6E0 443 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 FAM205CA6NFA0 338 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 H3BNC9 293 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 ASAP2O43150 1006 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 XRCC6P12956 609 aaKnown RBP eCLIP15.59■□□□□ 0.09
SEC13-204ENST00000397099 DARSP14868 501 aaKnown RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 SFPQP23246 707 aaKnown RBP eCLIP15.59■□□□□ 0.09
SEC13-204ENST00000397099 POLGP54098 1239 aaPredicted RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 PCBP1Q15365 356 aaKnown RBP eCLIP15.59■□□□□ 0.09
SEC13-204ENST00000397099 TMEM266Q2M3C6 531 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 RTN4RL1Q86UN2 441 aaPredicted RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 FAM228AQ86W67 206 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 TMEM40Q8WWA1 233 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 LINC01599Q8WXQ3 324 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 NECAB3Q96P71 396 aaPredicted RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 CEP89Q96ST8 783 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 ADAM2Q99965 735 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 CDHR5Q9HBB8 845 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 ANKEF1Q9NU02 776 aa15.59■□□□□ 0.09
SEC13-204ENST00000397099 SUCLA2Q9P2R7 463 aaPredicted RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.59■□□□□ 0.09
SEC13-204ENST00000397099 CARNS1A5YM72 827 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 SKIP12755 728 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 BMP1P13497 986 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 MUTP22033 750 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 U2AF2P26368 475 aaKnown RBP eCLIP15.58■□□□□ 0.085e-11■■□□□ 11.9
SEC13-204ENST00000397099 BMPR1AP36894 532 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 TXKP42681 527 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 FOSBP53539 338 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 FAM189BP81408 668 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 TIGD5Q53EQ6 642 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 ERMNQ8TAM6 284 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 P2RX5Q93086 422 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 MRPL38Q96DV4 380 aaKnown RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 CCDC43Q96MW1 224 aaKnown RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 HSD17B14Q9BPX1 270 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 DHX33Q9H6R0 707 aaKnown RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 TUFT1Q9NNX1 390 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 AAASQ9NRG9 546 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 TMEM161AQ9NX61 479 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 DAXXQ9UER7 740 aaPredicted RBP15.58■□□□□ 0.08
SEC13-204ENST00000397099 ARID2Q68CP9 1835 aa15.58■□□□□ 0.08
SEC13-204ENST00000397099 C9IYK1 514 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 LAD1O00515 517 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 DTNBO60941 627 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 SLITRK3O94933 977 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 EOMESO95936 686 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 MCM7P33993 719 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 CTNNB1P35222 781 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 GUCY1B3Q02153 619 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 GPM6BQ13491 265 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
SEC13-204ENST00000397099 TPH2Q8IWU9 490 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 DYDC2Q96IM9 177 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 TMX3Q96JJ7 454 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 TRAIPQ9BWF2 469 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 ATP6V0A4Q9HBG4 840 aa15.57■□□□□ 0.08
SEC13-204ENST00000397099 NCK2O43639 380 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 DGAT1O75907 488 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 OR52Z1P0C646 297 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
SEC13-204ENST00000397099 DSC3Q14574 896 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 XKR9Q5GH70 373 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 HAUS3Q68CZ6 603 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 RHPN2Q8IUC4 686 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 PPP1R16BQ96T49 567 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 RGL1Q9NZL6 768 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 COL4A3BPQ9Y5P4 624 aa15.56■□□□□ 0.08
SEC13-204ENST00000397099 FNDC1Q4ZHG4 1894 aaPredicted RBP15.56■□□□□ 0.08
SEC13-204ENST00000397099 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms