RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
GAPDH-202ENST00000396856 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
GAPDH-202ENST00000396856 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 PROB1E7EW31 1015 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 ZNF862O60290 1169 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 GPR32O75388 356 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 VTNP04004 478 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 CLCN3P51790 818 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 AK2P54819 239 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 ZXDAP98168 799 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 TBC1D8BQ0IIM8 1120 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 HYAL1Q12794 435 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 INF2Q27J81 1249 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 NAALADL2Q58DX5 795 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 EFCAB12Q6NXP0 572 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 SLC24A5Q71RS6 500 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 NEK8Q86SG6 692 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 FBXL6Q8N531 539 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 P2RX5Q93086 422 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
GAPDH-202ENST00000396856 OSMRQ99650 979 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 KCNJ14Q9UNX9 436 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 TTC3P53804 2025 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
GAPDH-202ENST00000396856 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.23
GAPDH-202ENST00000396856 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.23
GAPDH-202ENST00000396856 NCK2O43639 380 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 CDC42EP1Q00587 391 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 UGCGQ16739 394 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 LETM2Q2VYF4 491 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 XKR3Q5GH77 459 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 ADAM2Q99965 735 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 NIFKQ9BYG3 293 aaKnown RBP13.58□□□□□ -0.24
GAPDH-202ENST00000396856 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
GAPDH-202ENST00000396856 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-202ENST00000396856 LOC730098B7Z3J9 87 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 C9IYK1 514 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 TBX3O15119 743 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 MGEA5O60502 916 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 DKC1O60832 514 aaKnown RBP eCLIP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 TBX10O75333 385 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 EYA4O95677 639 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 MMP1P03956 469 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■□□□□ 9.6
GAPDH-202ENST00000396856 VCPP55072 806 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 CBX2Q14781 532 aaPredicted RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 TARBP2Q15633 366 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 CLUL1Q15846 466 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 EP400NLQ6ZTU2 488 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 FAM228AQ86W67 206 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 GJA10Q969M2 543 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 PPP1R16BQ96T49 567 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 ELAC1Q9H777 363 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 SEPT9Q9UHD8 586 aaPredicted RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 MRPL42Q9Y6G3 142 aaKnown RBP13.57□□□□□ -0.24
GAPDH-202ENST00000396856 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
GAPDH-202ENST00000396856 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
GAPDH-202ENST00000396856 GRM6O15303 877 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 SLC37A4O43826 429 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
GAPDH-202ENST00000396856 DNM2P50570 870 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PSMC5P62195 406 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 ADAM15Q13444 863 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 SMAD4Q13485 552 aaKnown RBP13.56□□□□□ -0.24
GAPDH-202ENST00000396856 CAMK1Q14012 370 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 LRRC71Q8N4P6 559 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 JPH2Q9BR39 696 aaPredicted RBP13.56□□□□□ -0.24
GAPDH-202ENST00000396856 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 AAASQ9NRG9 546 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
GAPDH-202ENST00000396856 LINC01565O15544 149 aa13.55□□□□□ -0.24
GAPDH-202ENST00000396856 HOXA2O43364 376 aa13.55□□□□□ -0.24
GAPDH-202ENST00000396856 MARCH6O60337 910 aa13.55□□□□□ -0.24
GAPDH-202ENST00000396856 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
GAPDH-202ENST00000396856 AVPR2P30518 371 aa13.55□□□□□ -0.24
GAPDH-202ENST00000396856 KRT2P35908 639 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms