RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SNCBQ16143 134 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 ADGRF4Q8IZF3 695 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 N4BP2L2Q92802 583 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 DNAJC17Q9NVM6 304 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 E9PMD0 336 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 PDIK1LQ8N165 341 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TMEM35BQ8NCS4 154 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 RAET1EQ8TD07 263 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 IQCA1LA6NCM1 817 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 M0QYV0 167 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 CNOT8Q9UFF9 292 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 KCNH4Q9UQ05 1017 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 ESRRBO95718 433 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 DCP1AQ9NPI6 582 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 ABCA8O94911 1581 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 QARSP47897 775 aaKnown RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 CYP27A1Q02318 531 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 GRM4Q14833 912 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 SNX2O60749 519 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 IFT88Q13099 833 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 EFHD1Q9BUP0 239 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 SLC7A5Q01650 507 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 KIF19Q2TAC6 998 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ACCSLQ4AC99 568 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 HABP4Q5JVS0 413 aaKnown RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 SZRD1Q7Z422 152 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 GJD4Q96KN9 370 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 POTECB2RU33 542 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 F5H6K3 240 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 OCRLQ01968 901 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 KLRC3Q07444 240 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 COASYQ13057 564 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 CUL4AQ13619 759 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 SNX19Q92543 992 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 FMO2Q99518 471 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 CALB1P05937 261 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 COPB2P35606 906 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 TXNRD1Q16881 649 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 SP8Q8IXZ3 490 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ENAHQ8N8S7 591 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 RBM41Q96IZ5 413 aaKnown RBP11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 STRIP2Q9ULQ0 834 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 RASGRF2O14827 1237 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 CPB1P15086 417 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 ADORA2BP29275 332 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 OR6J1Q8NGC5 347 aa11.11□□□□□ -0.63
COL4A6-203ENST00000394872 STAT3P40763 770 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CCDC124Q96CT7 223 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 KRT82Q9NSB4 513 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 ASB14A6NK59 587 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 VAMP7P51809 220 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 NME3Q13232 169 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 ATG16L1Q676U5 607 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 MAML1Q92585 1016 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CFLARO15519 480 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CNOT10Q9H9A5 744 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CEP72Q9P209 647 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 TMEM247A6NEH6 219 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 TNPO2O14787 897 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 FGGP02679 453 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 TBXAS1P24557 533 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms