RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 AIPL1Q9NZN9 384 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 LARSQ9P2J5 1176 aaKnown RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 DDX41Q9UJV9 622 aaKnown RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 PTK2Q05397 1052 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 ASIC2Q16515 512 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 ZNF571Q7Z3V5 609 aaPredicted RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 GPR161Q8N6U8 529 aaKnown RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 MOV10L1Q9BXT6 1211 aaKnown RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 ANKZF1Q9H8Y5 726 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 PHIPQ8WWQ0 1821 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 LYPLA2O95372 231 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 PLS3P13797 630 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 NOL9Q5SY16 702 aaKnown RBP16.48■□□□□ 0.23
GPC3-202ENST00000394299 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
GPC3-202ENST00000394299 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 HAUS6Q7Z4H7 955 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
GPC3-202ENST00000394299 PLCB1Q9NQ66 1216 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
GPC3-202ENST00000394299 PCDHA10Q9Y5I2 948 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 MYH11P35749 1972 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 NCK2O43639 380 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 OAZ1P54368 228 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 KRT76Q01546 638 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 PNKPQ96T60 521 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 ELP3Q9H9T3 547 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 FRMD4BQ9Y2L6 1034 aa16.48■□□□□ 0.23
GPC3-202ENST00000394299 CTAGE15A4D2H0 777 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 GOLGA8IPA6NC78 632 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 GOLGA8JA6NMD2 632 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 PDE2AO00408 941 aaPredicted RBP16.47■□□□□ 0.23
GPC3-202ENST00000394299 CTAGE8P0CG41 777 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 FMO5P49326 533 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 JAK3P52333 1124 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 CTAGE6Q86UF2 777 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 CTAGE4Q8IX94 777 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 GPRASP2Q96D09 838 aa16.47■□□□□ 0.23
GPC3-202ENST00000394299 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
GPC3-202ENST00000394299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.23
GPC3-202ENST00000394299 CCDC169A6NNP5 214 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 IRF6O14896 467 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 STBD1O95210 358 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 CXCR5P32302 372 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 NAP1L1P55209 391 aaKnown RBP16.46■□□□□ 0.23
GPC3-202ENST00000394299 NFIL3Q16649 462 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 CCDC60Q8IWA6 550 aaPredicted RBP16.46■□□□□ 0.23
GPC3-202ENST00000394299 ZNF526Q8TF50 670 aaPredicted RBP16.46■□□□□ 0.23
GPC3-202ENST00000394299 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
GPC3-202ENST00000394299 TSGA10Q9BZW7 698 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 MYH10P35580 1976 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 ATP2A1O14983 1001 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 KLRC1P26715 233 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 SFNP31947 248 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 SLC18A3Q16572 532 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 CEP170P1Q96L14 293 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 SMARCAL1Q9NZC9 954 aa16.46■□□□□ 0.23
GPC3-202ENST00000394299 ANKRD63C9JTQ0 380 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 GFPT2O94808 682 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
GPC3-202ENST00000394299 SH3D19Q5HYK7 790 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 SEPT14Q6ZU15 432 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 SULF1Q8IWU6 871 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 PLEKHO2Q8TD55 490 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 COG1Q8WTW3 980 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 HINFPQ9BQA5 517 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
GPC3-202ENST00000394299 EHD2Q9NZN4 543 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 PJA2O43164 708 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 TACC1O75410 805 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 ACTR2P61160 394 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 TUBB2AQ13885 445 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 ZNF746Q6NUN9 644 aaPredicted RBP16.45■□□□□ 0.22
GPC3-202ENST00000394299 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 ACCSQ96QU6 501 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 MKNK1Q9BUB5 465 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 TUBB2BQ9BVA1 445 aa16.45■□□□□ 0.22
GPC3-202ENST00000394299 JPH1Q9HDC5 661 aaPredicted RBP16.45■□□□□ 0.22
GPC3-202ENST00000394299 UBE4BO95155 1302 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms