RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 DNAJC19Q96DA6 116 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 SH2D3AQ9BRG2 576 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 RAB17Q9H0T7 212 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 GANQ9H2C0 597 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ASIC3Q9UHC3 531 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 TMEM59LQ9UK28 342 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 TJP1Q07157 1748 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ATXN2Q99700 1313 aaKnown RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 PVALEFA0A1B0GWK0 134 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 DNAJC8O75937 253 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 CALCAP01258 141 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 LDHBP07195 334 aaKnown RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 RARAP10276 462 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 STX2P32856 288 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 COG2Q14746 738 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 DAB2IPQ5VWQ8 1189 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 FITM2Q8N6M3 262 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ACTRT1Q8TDG2 376 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ZNF483Q8TF39 744 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 NKX1-2Q9UD57 310 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 LAD1O00515 517 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 RTN2O75298 545 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 PRPHP41219 470 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 STAT1P42224 750 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 KYNUQ16719 465 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 PRR16Q569H4 304 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 DGKHQ86XP1 1220 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ATG4AQ8WYN0 398 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 NSRP1Q9H0G5 558 aaKnown RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ADAM7Q9H2U9 754 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 ZBTB39O15060 712 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 TNFAIP3P21580 790 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 KIAA0825Q8IV33 1275 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 PIDD1Q9HB75 910 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 HAO1Q9UJM8 370 aa17.68■□□□□ 0.42
PHTF1-205ENST00000393357 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-205ENST00000393357 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 DLATP10515 647 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 MSH2P43246 934 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 SSR1P43307 286 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 RAD23BP54727 409 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 AP1ARQ63HQ0 302 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 FAM43BQ6ZT52 329 aaPredicted RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 CALR3Q96L12 384 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 TOM1O60784 492 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 CTTNQ14247 550 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 USH1GQ495M9 461 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 CCDC137Q6PK04 289 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 CNOT10Q9H9A5 744 aaKnown RBP17.67■□□□□ 0.42
PHTF1-205ENST00000393357 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
PHTF1-205ENST00000393357 ATP2A2P16615 1042 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 RASA1P20936 1047 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 POLE2P56282 527 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 LNX1Q8TBB1 728 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 SLC20A1Q8WUM9 679 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 NUCKS1Q9H1E3 243 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 CPSF2Q9P2I0 782 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 STK17AQ9UEE5 414 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 LRP6O75581 1613 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 CCDC188H7C350 402 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 RBAK-RBAKDNI3L0D1 243 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 MAP3K13O43283 966 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 SPOPO43791 374 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 PPP1R2P41236 205 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 CDK8P49336 464 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 UBXN2AP68543 259 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 MXRA7P84157 204 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 EXOC3L1Q86VI1 746 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 HOOK2Q96ED9 719 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 C9orf72Q96LT7 481 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 TGS1Q96RS0 853 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 PCIF1Q9H4Z3 704 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 PKD2L1Q9P0L9 805 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 A0A1W2PRG0 241 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 PALM3A6NDB9 673 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 SNX3O60493 162 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 SUN1O94901 812 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 BRAFP15056 766 aa17.66■□□□□ 0.42
PHTF1-205ENST00000393357 SSTR3P32745 418 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 LACTB2Q53H82 288 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 ALG13Q9NP73 1137 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 MTRF1LQ9UGC7 380 aaKnown RBP17.66■□□□□ 0.42
PHTF1-205ENST00000393357 C5orf60A6NFR6 353 aa17.65■□□□□ 0.42
PHTF1-205ENST00000393357 MED24O75448 989 aa17.65■□□□□ 0.42
PHTF1-205ENST00000393357 NMT1P30419 496 aaKnown RBP17.65■□□□□ 0.42
PHTF1-205ENST00000393357 IL6STP40189 918 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms