RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PLXDC1Q8IUK5 500 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SLITRK4Q8IW52 837 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PLEKHM2Q8IWE5 1019 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PHACTR4Q8IZ21 702 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CHPFQ8IZ52 775 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 GJD3Q8N144 294 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 OGFOD1Q8N543 542 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 Q8N7P7 452 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MB21D1Q8N884 522 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MAPK1IP1LQ8NDC0 245 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM52Q8NDY8 209 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 C16orf52Q8NHV5 167 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 STK35Q8TDR2 534 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ATXN2LQ8WWM7 1075 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ASB10Q8WXI3 467 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CLP1Q92989 425 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ATP2A3Q93084 1043 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NKD2Q969F2 451 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CCDC74AQ96AQ1 378 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PLPPR2Q96GM1 343 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TOE1Q96GM8 510 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MED30Q96HR3 178 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF479Q96JC4 524 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RHOVQ96L33 236 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PTCHD1Q96NR3 888 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MTA3Q9BTC8 594 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 UBXN6Q9BZV1 441 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM234AQ9H0X4 552 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 OR10A2Q9H208 303 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 EHD4Q9H223 541 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 GSTO2Q9H4Y5 243 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MVB12BQ9H7P6 319 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MRPL44Q9H9J2 332 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PELI2Q9HAT8 420 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CPNE5Q9HCH3 593 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ABCB6Q9NP58 842 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 AKIP1Q9NQ31 210 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RTN4Q9NQC3 1192 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SNRKQ9NRH2 765 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CHST7Q9NS84 486 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 POT1Q9NUX5 634 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RNF181Q9P0P0 153 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF581Q9P0T4 197 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SFMBT1Q9UHJ3 866 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 EIF2B4Q9UI10 523 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZFP69BQ9UJL9 534 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAM30Q9UKF2 790 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 POU2F3Q9UKI9 436 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TRAK1Q9UPV9 953 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RWDD3Q9Y3V2 267 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDHB6Q9Y5E3 794 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SNCAIPQ9Y6H5 919 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RP1L1Q8IWN7 2480 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 AOX1Q06278 1338 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CYP2D7A0A087X1C5 515 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 A0A0U1RQF3 1178 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM238LA0A1B0GVL6 79 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 SMIM35A0A1B0GVV1 85 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ZBTB7CA1YPR0 619 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 MEIOCA2RUB1 952 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CCDC151A5D8V7 595 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L3A6NCW0 530 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L4A6NCW7 530 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 C2orf71A6NGG8 1288 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 UNC119BA6NIH7 251 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 MYO1FO00160 1098 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDH17O14917 1159 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 HGSO14964 777 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 HOXA3O43365 443 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 EDIL3O43854 480 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ZG16O60844 167 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 MFAP3LO75121 409 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TULP3O75386 442 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CRLF1O75462 422 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 SRSF10O75494 262 aaKnown RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 NCR1O76036 304 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 DKK1O94907 266 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 SPDEFO95238 335 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 FOSP01100 380 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 EGFP01133 1207 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PDGFAP04085 211 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 NTRK1P04629 796 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 POLR3DP05423 398 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 GSNP06396 782 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PGRP06401 933 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 DCAF8L2P0C7V8 631 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 SPATA31D3P0C874 917 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PRB4P10163 310 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 EGR2P11161 476 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PSG1P11464 419 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 XRCC5P13010 732 aaKnown RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 GNAT2P19087 354 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TNFRSF8P28908 595 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CDC25AP30304 524 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CDC25CP30307 473 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CEACAM8P31997 349 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ARHGAP25P42331 645 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CTSKP43235 329 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 KCNJ5P48544 419 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms