RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
FANCA-202ENST00000389301 COPS2P61201 443 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 OSTNP61366 133 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 NIM1KQ8IY84 436 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 ZBED8Q8IZ13 594 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 PPM1NQ8N819 430 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
FANCA-202ENST00000389301 ARL2BPQ9Y2Y0 163 aa13.36□□□□□ -0.27
FANCA-202ENST00000389301 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.36□□□□□ -0.27
FANCA-202ENST00000389301 ZNF18P17022 549 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 PSMC1P62191 440 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 PDIA2Q13087 525 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 ALCAMQ13740 583 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 SFR1Q86XK3 245 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 RAD54LQ92698 747 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 BATF3Q9NR55 127 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 CHN1P15882 459 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 SLC30A9Q6PML9 568 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 PGM1P36871 562 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 ERFP50548 548 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 COASYQ13057 564 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 DTX3LQ8TDB6 740 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 MRPL40Q9NQ50 206 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 STRIP2Q9ULQ0 834 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 GDF11O95390 407 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
FANCA-202ENST00000389301 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 AKT3Q9Y243 479 aa13.35□□□□□ -0.27
FANCA-202ENST00000389301 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 MTERF2Q49AM1 385 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 MS4A14Q96JA4 679 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 SYF2O95926 243 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 KRT14P02533 472 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 GPS1Q13098 491 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 TTC13Q8NBP0 860 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 DHX38Q92620 1227 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 SOX5P35711 763 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 RARS2Q5T160 578 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 PIGOQ8TEQ8 1089 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 LIMA1Q9UHB6 759 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 RPAP1Q9BWH6 1393 aaPredicted RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 GCLMP48507 274 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 NEK2P51955 445 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 DTNBP1Q96EV8 351 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 STRBPQ96SI9 672 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 SLC13A1Q9BZW2 595 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 STX18Q9P2W9 335 aaKnown RBP13.34□□□□□ -0.27
FANCA-202ENST00000389301 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
FANCA-202ENST00000389301 CCDC22O60826 627 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 BMP3P12645 472 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 HOXA13P31271 388 aaPredicted RBP13.33□□□□□ -0.27
FANCA-202ENST00000389301 ABCD1P33897 745 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 KCNJ6P48051 423 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 DAB2P98082 770 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 TNFAIP1Q13829 316 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.27
FANCA-202ENST00000389301 TBC1D9BQ66K14 1250 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 TMEM154Q6P9G4 183 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 C1orf54Q8WWF1 131 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 UBN1Q9NPG3 1134 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 EHD2Q9NZN4 543 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 LZTS1Q9Y250 596 aa13.33□□□□□ -0.27
FANCA-202ENST00000389301 PVALEFA0A1B0GWK0 134 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 KDM1AO60341 852 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 CUL3Q13618 768 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 RASGRF1Q13972 1273 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 ZNF746Q6NUN9 644 aaPredicted RBP13.33□□□□□ -0.28
FANCA-202ENST00000389301 CCNI2Q6ZMN8 369 aaPredicted RBP13.33□□□□□ -0.28
FANCA-202ENST00000389301 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
FANCA-202ENST00000389301 ZBTB18Q99592 522 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms