RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 RDM1Q8NG50 284 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 ADAMTS10Q9H324 1103 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 UNC45AQ9H3U1 944 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 EDIL3O43854 480 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 COASYQ13057 564 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 Q4G0T1 1027 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 MIER3Q7Z3K6 550 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 CDCA3Q99618 268 aaPredicted RBP29.77■■■□□ 2.36
NPHP3-202ENST00000383282 CWH43Q9H720 699 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 CLEC1BQ9P126 229 aa29.77■■■□□ 2.36
NPHP3-202ENST00000383282 GPC3P51654 580 aa29.76■■■□□ 2.35
NPHP3-202ENST00000383282 UGCGQ16739 394 aa29.76■■■□□ 2.35
NPHP3-202ENST00000383282 SMRP1Q8NCR6 262 aa29.76■■■□□ 2.35
NPHP3-202ENST00000383282 ZNF274Q96GC6 653 aaPredicted RBP29.76■■■□□ 2.35
NPHP3-202ENST00000383282 HCSTQ9UBK5 93 aa29.76■■■□□ 2.35
NPHP3-202ENST00000383282 PUF60Q9UHX1 559 aaKnown RBP29.76■■■□□ 2.35
NPHP3-202ENST00000383282 BARX2Q9UMQ3 279 aaPredicted RBP29.76■■■□□ 2.35
NPHP3-202ENST00000383282 PCDHGC5Q9Y5F6 944 aa29.76■■■□□ 2.35
NPHP3-202ENST00000383282 BLIDQ8IZY5 108 aa29.75■■■□□ 2.35
NPHP3-202ENST00000383282 FAM177A1Q8N128 213 aaPredicted RBP29.75■■■□□ 2.35
NPHP3-202ENST00000383282 LRRC43Q8N309 656 aa29.75■■■□□ 2.35
NPHP3-202ENST00000383282 NLRP7Q8WX94 980 aa29.75■■■□□ 2.35
NPHP3-202ENST00000383282 ZNF668Q96K58 619 aaPredicted RBP29.75■■■□□ 2.35
NPHP3-202ENST00000383282 LZTS1Q9Y250 596 aa29.75■■■□□ 2.35
NPHP3-202ENST00000383282 FNDC1Q4ZHG4 1894 aaPredicted RBP29.74■■■□□ 2.35
NPHP3-202ENST00000383282 PSMD10O75832 226 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 CDC42EP1Q00587 391 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 GALNT17Q6IS24 598 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 ECHDC2Q86YB7 292 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 GJA10Q969M2 543 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 CASD1Q96PB1 797 aa29.74■■■□□ 2.35
NPHP3-202ENST00000383282 SEPT9Q9UHD8 586 aaPredicted RBP29.74■■■□□ 2.35
NPHP3-202ENST00000383282 PER2O15055 1255 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 GLP2RO95838 553 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 SRGAP2BP0DMP2 458 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 DARSP14868 501 aaKnown RBP29.73■■■□□ 2.35
NPHP3-202ENST00000383282 PPM1AP35813 382 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 XKR3Q5GH77 459 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 RNF135Q8IUD6 432 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 DAGLBQ8NCG7 672 aa29.73■■■□□ 2.35
NPHP3-202ENST00000383282 MRPS27Q92552 414 aaKnown RBP29.73■■■□□ 2.35
NPHP3-202ENST00000383282 CYP3A7-CYP3A51PA0A087WV96 503 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 TDP2O95551 362 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 CYP3A7P24462 503 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 DNM2P50570 870 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 ERVFC1P60507 584 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 PLCB3Q01970 1234 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 DUSP6Q16828 381 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 MTERF2Q49AM1 385 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 HERC4Q5GLZ8 1057 aaPredicted RBP29.72■■■□□ 2.35
NPHP3-202ENST00000383282 MOXD1Q6UVY6 613 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 RNF169Q8NCN4 708 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 ZNF558Q96NG5 402 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 TM6SF1Q9BZW5 370 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 DACT1Q9NYF0 836 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 MUTYHQ9UIF7 546 aa29.72■■■□□ 2.35
NPHP3-202ENST00000383282 FSCN2O14926 492 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 KRT17Q04695 432 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 STK3Q13188 491 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 NONOQ15233 471 aaKnown RBP eCLIP29.71■■■□□ 2.35
NPHP3-202ENST00000383282 TARBP2Q15633 366 aaKnown RBP29.71■■■□□ 2.35
NPHP3-202ENST00000383282 PLPP4Q5VZY2 271 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 KCNT2Q6UVM3 1135 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 NIFKQ9BYG3 293 aaKnown RBP29.71■■■□□ 2.35
NPHP3-202ENST00000383282 GCOM2Q9BZD3 368 aaPredicted RBP29.71■■■□□ 2.35
NPHP3-202ENST00000383282 ENTPD7Q9NQZ7 604 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 USP15Q9Y4E8 981 aaPredicted RBP29.71■■■□□ 2.35
NPHP3-202ENST00000383282 PLXNA4Q9HCM2 1894 aa29.71■■■□□ 2.35
NPHP3-202ENST00000383282 A0A0U1RQF3 1178 aa29.7■■■□□ 2.35
NPHP3-202ENST00000383282 EOMESO95936 686 aa29.7■■■□□ 2.35
NPHP3-202ENST00000383282 KRT25Q7Z3Z0 450 aa29.7■■■□□ 2.35
NPHP3-202ENST00000383282 LARP6Q9BRS8 491 aaKnown RBP29.7■■■□□ 2.35
NPHP3-202ENST00000383282 NGRNQ9NPE2 291 aaKnown RBP29.7■■■□□ 2.35
NPHP3-202ENST00000383282 RNF19AQ9NV58 838 aa29.7■■■□□ 2.35
NPHP3-202ENST00000383282 M0R2N6 131 aa29.69■■■□□ 2.34
NPHP3-202ENST00000383282 FGFR4P22455 802 aa29.69■■■□□ 2.34
NPHP3-202ENST00000383282 HOXD11P31277 338 aaPredicted RBP29.69■■■□□ 2.34
NPHP3-202ENST00000383282 LRRC55Q6ZSA7 311 aa29.69■■■□□ 2.34
NPHP3-202ENST00000383282 TCF25Q9BQ70 676 aa29.69■■■□□ 2.34
NPHP3-202ENST00000383282 PDRG1Q9NUG6 133 aa29.69■■■□□ 2.34
NPHP3-202ENST00000383282 DDX25Q9UHL0 483 aaKnown RBP29.69■■■□□ 2.34
NPHP3-202ENST00000383282 B3GNT9Q6UX72 402 aa29.68■■■□□ 2.34
NPHP3-202ENST00000383282 ETNPPLQ8TBG4 499 aa29.68■■■□□ 2.34
NPHP3-202ENST00000383282 MBOAT7Q96N66 472 aa29.68■■■□□ 2.34
NPHP3-202ENST00000383282 PHF7Q9BWX1 381 aaPredicted RBP29.68■■■□□ 2.34
NPHP3-202ENST00000383282 MRPL9Q9BYD2 267 aaKnown RBP29.68■■■□□ 2.34
NPHP3-202ENST00000383282 INO80BQ9C086 356 aaPredicted RBP29.68■■■□□ 2.34
NPHP3-202ENST00000383282 CHST12Q9NRB3 414 aa29.68■■■□□ 2.34
NPHP3-202ENST00000383282 SPG21Q9NZD8 308 aa29.68■■■□□ 2.34
NPHP3-202ENST00000383282 C5orf42Q9H799 3197 aa29.67■■■□□ 2.34
NPHP3-202ENST00000383282 CDKL5O76039 1030 aa29.67■■■□□ 2.34
NPHP3-202ENST00000383282 SFPQP23246 707 aaKnown RBP eCLIP29.67■■■□□ 2.34
NPHP3-202ENST00000383282 DRP2Q13474 957 aa29.67■■■□□ 2.34
NPHP3-202ENST00000383282 INF2Q27J81 1249 aa29.67■■■□□ 2.34
NPHP3-202ENST00000383282 AIFM3Q96NN9 605 aa29.67■■■□□ 2.34
NPHP3-202ENST00000383282 JPH2Q9BR39 696 aaPredicted RBP29.67■■■□□ 2.34
NPHP3-202ENST00000383282 DDX11L8A8MPP1 907 aa29.66■■■□□ 2.34
NPHP3-202ENST00000383282 XBP1P17861 261 aa29.66■■■□□ 2.34
NPHP3-202ENST00000383282 PSMC5P62195 406 aa29.66■■■□□ 2.34
NPHP3-202ENST00000383282 LETM2Q2VYF4 491 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms