RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 MSH4O15457 936 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 PAEPP09466 180 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 FCER1AP12319 257 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 LMNB1P20700 586 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 STAT3P40763 770 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 MRPS25P82663 173 aaKnown RBP9.74□□□□□ -0.85
GPNMB-202ENST00000381990 IFT88Q13099 833 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 PSMD2Q13200 908 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 MTMR3Q13615 1198 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 ANGEL2Q5VTE6 544 aaKnown RBP9.74□□□□□ -0.85
GPNMB-202ENST00000381990 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 MAATS1Q7Z4T9 603 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 CASKIN2Q8WXE0 1202 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 EEF2KMTQ96G04 330 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 MS4A14Q96JA4 679 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 CALR3Q96L12 384 aaKnown RBP9.74□□□□□ -0.85
GPNMB-202ENST00000381990 ZNF112Q9UJU3 913 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 CCPG1Q9ULG6 757 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 PLAAQ9Y263 795 aa9.74□□□□□ -0.85
GPNMB-202ENST00000381990 POTEB3A0JP26 581 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 POTECB2RU33 542 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 TRAPPC3O43617 180 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 PSEN1P49768 467 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SNCBQ16143 134 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 TDRD12Q587J7 1177 aaKnown RBP9.73□□□□□ -0.85
GPNMB-202ENST00000381990 C10orf76Q5T2E6 689 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 POTEBQ6S5H4 581 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SCYL3Q8IZE3 742 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 GPC2Q8N158 579 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 USP38Q8NB14 1042 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 DNAJC19Q96DA6 116 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 KRT12Q99456 494 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 TSG101Q99816 390 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 WDR18Q9BV38 432 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SLC12A6Q9UHW9 1150 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 MCM8Q9UJA3 840 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 ZNF536O15090 1300 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 BUB1O43683 1085 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 MED24O75448 989 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 PALMO75781 387 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 PLA2G4BP0C869 781 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 RPA1P27694 616 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 NF2P35240 595 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 GUCY2FP51841 1108 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 EHHADHQ08426 723 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
GPNMB-202ENST00000381990 AGBL2Q5U5Z8 902 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SFMBT2Q5VUG0 894 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 CYP2W1Q8TAV3 490 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 CCDC114Q96M63 670 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 AGBL1Q96MI9 1066 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SLC40A1Q9NP59 571 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 SLC39A2Q9NP94 309 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 VAV3Q9UKW4 847 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 PNMA2Q9UL42 364 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 RABGAP1Q9Y3P9 1069 aa9.73□□□□□ -0.85
GPNMB-202ENST00000381990 ESYT3A0FGR9 886 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 C5orf60A6NFR6 353 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 E9PMD0 336 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SSBP05455 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
GPNMB-202ENST00000381990 VCAM1P19320 739 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SLC8A1P32418 973 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 HSD17B4P51659 736 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SEC24CP53992 1094 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 MTMR2Q13614 643 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 CATSPER3Q86XQ3 398 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 TAF4BQ92750 862 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 HPS3Q969F9 1004 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SGSM3Q96HU1 749 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 PBKQ96KB5 322 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 TANGO6Q9C0B7 1094 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 AS3MTQ9HBK9 375 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SLC38A10Q9HBR0 1119 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 PPP2R3BQ9Y5P8 575 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 ZSCAN5CA6NGD5 496 aaPredicted RBP9.72□□□□□ -0.85
GPNMB-202ENST00000381990 FDX1P10109 184 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 ELF1P32519 619 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 GHRHRQ02643 423 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SPP2Q13103 211 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 LACTB2Q53H82 288 aaPredicted RBP9.72□□□□□ -0.85
GPNMB-202ENST00000381990 LRRC55Q6ZSA7 311 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 GPBP1Q86WP2 473 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 MCF2L2Q86YR7 1114 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 ANKRD13CQ8N6S4 541 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 ACTRT1Q8TDG2 376 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 PICK1Q9NRD5 415 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
GPNMB-202ENST00000381990 ATP8B3O60423 1300 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 POTEFA5A3E0 1075 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 H0YGN5 161 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 RAD51CO43502 376 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 FLOT1O75955 427 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 GNA14O95837 355 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms