RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 NKX3-2P78367 333 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 GSE1Q14687 1217 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 EFCAB12Q6NXP0 572 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 PCSK9Q8NBP7 692 aaKnown RBP16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 VTI1AQ96AJ9 217 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 CBX8Q9HC52 389 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 CTNND2Q9UQB3 1225 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 PCDHA2Q9Y5H9 948 aa16.34■□□□□ 0.21
CHRDL2-202ENST00000376324 COL1A2P08123 1366 aa16.33■□□□□ 0.21
CHRDL2-202ENST00000376324 TRIP12Q14669 1992 aaPredicted RBP16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 C22orf31O95567 290 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 CASP5P51878 434 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 STIM1Q13586 685 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 C7orf31Q8N865 590 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 ASAP3Q8TDY4 903 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 HDAC6Q9UBN7 1215 aa16.33■□□□□ 0.2
CHRDL2-202ENST00000376324 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 K7ENM7 598 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 ZNF200P98182 395 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 ZC2HC1CQ53FD0 456 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 EXOC8Q8IYI6 725 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 RETREG2Q8NC44 543 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 IFT74Q96LB3 600 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 JPH2Q9BR39 696 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 SUCLA2Q9P2R7 463 aaPredicted RBP16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 SEL1LQ9UBV2 794 aa16.32■□□□□ 0.2
CHRDL2-202ENST00000376324 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 SLC16A4O15374 487 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 MAGEB2O15479 319 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 GJB1P08034 283 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 GLRA2P23416 452 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 ARL2P36404 184 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 ACLYP53396 1101 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 HIC1Q14526 733 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 MARCH8Q5T0T0 291 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 IER5Q5VY09 327 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 KSR1Q8IVT5 923 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 MYOCDQ8IZQ8 938 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 PAK6Q9NQU5 681 aaPredicted RBP16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 OLFML3Q9NRN5 406 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
CHRDL2-202ENST00000376324 IGKV6-21A0A0C4DH24 114 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 GOLGA6L3A6NEY3 463 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 BECN2A8MW95 431 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PSMA7O14818 248 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 NPTX2P47972 431 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 DNM2P50570 870 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PSPC1Q8WXF1 523 aaKnown RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 FIZ1Q96SL8 496 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PPP1R16BQ96T49 567 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 KMT5AQ9NQR1 393 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 GAS2O43903 313 aaKnown RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 CAVIN2O95810 425 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 SMTNP53814 917 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PAK1Q13153 545 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 IQCB1Q15051 598 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 PKN2Q16513 984 aaKnown RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 ZNF720Q7Z2F6 126 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
CHRDL2-202ENST00000376324 KBTBD13C9JR72 458 aa16.29■□□□□ 0.2
CHRDL2-202ENST00000376324 TREHO43280 583 aa16.29■□□□□ 0.2
CHRDL2-202ENST00000376324 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
CHRDL2-202ENST00000376324 CYP2C9P11712 490 aa16.29■□□□□ 0.2
CHRDL2-202ENST00000376324 TMOD1P28289 359 aa16.29■□□□□ 0.2
CHRDL2-202ENST00000376324 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms