RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SPDL1Q96EA4 605 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 AP1M1Q9BXS5 423 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 NYAP2Q9P242 653 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 ENTPD3O75355 529 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 OR52Z1P0C646 297 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 CALRP27797 417 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 TMEM179Q6ZVK1 233 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 BZW1Q7L1Q6 419 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 NIM1KQ8IY84 436 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 GOLPH3Q9H4A6 298 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 SLC12A4Q9UP95 1085 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 CDC25CP30307 473 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 IKQ13123 557 aaPredicted RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 SLC9C1Q4G0N8 1177 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 GPATCH4Q5T3I0 446 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 CRELD2Q6UXH1 353 aaPredicted RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 TBC1D1Q86TI0 1168 aaPredicted RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 ARMC2Q8NEN0 867 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 TBC1D5Q92609 795 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 SGIP1Q9BQI5 828 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 POTEMA6NI47 508 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 NFKBIEO00221 500 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 IRF6O14896 467 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 DAPK3O43293 454 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 DGKZQ13574 1117 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 PTPROQ16827 1216 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 KIAA0753Q2KHM9 967 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 TAF4BQ92750 862 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 ZNF317Q96PQ6 595 aaPredicted RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 FAM129AQ9BZQ8 928 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 DDX47Q9H0S4 455 aaKnown RBP14.04□□□□□ -0.16
MSH5-204ENST00000375755 RIC8AQ9NPQ8 531 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 BATF3Q9NR55 127 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 PCDHA1Q9Y5I3 950 aa14.04□□□□□ -0.16
MSH5-204ENST00000375755 A0A087X0T9 212 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 WNT10BO00744 389 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 CEP104O60308 925 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 FAM228BP0C875 321 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 MTMR3Q13615 1198 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 CDCA2Q69YH5 1023 aaPredicted RBP14.03□□□□□ -0.16
MSH5-204ENST00000375755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.03□□□□□ -0.16
MSH5-204ENST00000375755 TMC3Q7Z5M5 1100 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 AGAP11Q8TF27 550 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 PSTPIP2Q9H939 334 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 PNMA2Q9UL42 364 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 F8VZ95 297 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 NOL4O94818 638 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 SERPING1P05155 500 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 PPP1R2P41236 205 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 CLK2P49760 499 aaKnown RBP14.03□□□□□ -0.16
MSH5-204ENST00000375755 RIPK1Q13546 671 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 RPS6KA1Q15418 735 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 DALRD3Q5D0E6 543 aaKnown RBP14.03□□□□□ -0.16
MSH5-204ENST00000375755 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 CNNM4Q6P4Q7 775 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 TLCD1Q96CP7 247 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
MSH5-204ENST00000375755 ZNF570Q96NI8 536 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 CUEDC2Q9H467 287 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
MSH5-204ENST00000375755 ESYT2A0FGR8 921 aa14.02□□□□□ -0.16
MSH5-204ENST00000375755 SARNPP82979 210 aaKnown RBP14.02□□□□□ -0.16
MSH5-204ENST00000375755 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.16
MSH5-204ENST00000375755 TANGO6Q9C0B7 1094 aa14.02□□□□□ -0.16
MSH5-204ENST00000375755 MAGEF1Q9HAY2 307 aa14.02□□□□□ -0.16
MSH5-204ENST00000375755 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
MSH5-204ENST00000375755 GSTA1P08263 222 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 PEX19P40855 299 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 ARID5AQ03989 594 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 DHX9Q08211 1270 aaKnown RBP14.02□□□□□ -0.17
MSH5-204ENST00000375755 COBLL1Q53SF7 1204 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.17
MSH5-204ENST00000375755 FAM83BQ5T0W9 1011 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 MTMR9Q96QG7 549 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 SPAG5Q96R06 1193 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.02□□□□□ -0.17
MSH5-204ENST00000375755 EDEM3Q9BZQ6 932 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 AGAP1Q9UPQ3 857 aa14.02□□□□□ -0.17
MSH5-204ENST00000375755 KIF4AO95239 1232 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 SLC18A3Q16572 532 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CALCRLQ16602 461 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 LRRC55Q6ZSA7 311 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 FAM151AQ8WW52 585 aa14.01□□□□□ -0.17
MSH5-204ENST00000375755 CNOT10Q9H9A5 744 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms