RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 EFR3AQ14156 821 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 SPATA1Q5VX52 437 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 RETSATQ6NUM9 610 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 EGFL7Q9UHF1 273 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 WDR17Q8IZU2 1322 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 KCNJ6P48051 423 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 CCT5P48643 541 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 CTAG1AP78358 180 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 NPLOC4Q8TAT6 608 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 PPM1MQ96MI6 270 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 NIF3L1Q9GZT8 377 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.83□□□□□ -0.84
UBR4-201ENST00000375218 CYP2D7A0A087X1C5 515 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 POLBP06746 335 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 OCLNQ16625 522 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 C4orf50Q6ZRC1 276 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 HDAC2Q92769 488 aaKnown RBP9.83□□□□□ -0.84
UBR4-201ENST00000375218 SYNDIG1Q9H7V2 258 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 AAASQ9NRG9 546 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 USP16Q9Y5T5 823 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 SYNJ2BP-COX16A0A087WUM0 186 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 SLC12A8A0AV02 714 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 PI4K2BG5E9Z4 385 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 ZW10O43264 779 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 RTN2O75298 545 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 HSPA8P11142 646 aaKnown RBP9.83□□□□□ -0.84
UBR4-201ENST00000375218 HAUS3Q68CZ6 603 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 INTS8Q75QN2 995 aaKnown RBP9.83□□□□□ -0.84
UBR4-201ENST00000375218 SPATA21Q7Z572 469 aa9.83□□□□□ -0.84
UBR4-201ENST00000375218 RNF168Q8IYW5 571 aaPredicted RBP9.83□□□□□ -0.84
UBR4-201ENST00000375218 DDX23Q9BUQ8 820 aaKnown RBP9.83□□□□□ -0.84
UBR4-201ENST00000375218 CD2BP2O95400 341 aaKnown RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 CHGBP05060 677 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 EEF2P13639 858 aaKnown RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 GDI1P31150 447 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 MAN2A2P49641 1150 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 SNX1Q13596 522 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 TAF5Q15542 800 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 BOLA3Q53S33 107 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 EPHA10Q5JZY3 1008 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 PPP1R42Q7Z4L9 355 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 NLRP10Q86W26 655 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 AADATQ8N5Z0 425 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 RUBCNQ92622 972 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 AIPL1Q9NZN9 384 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 CXXC1Q9P0U4 656 aaPredicted RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 AP1M2Q9Y6Q5 423 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 PDHBP11177 359 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 KRT9P35527 623 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 PEX5P50542 639 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 PMS1P54277 932 aaKnown RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 LLGL1Q15334 1064 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 RNF10Q8N5U6 811 aaKnown RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 STIM2Q9P246 746 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 ITGB1BP2Q9UKP3 347 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 TNKSO95271 1327 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 A8MVJ9 347 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 STAT1P42224 750 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 GABPB1Q06547 395 aaPredicted RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 OR6C4Q8NGE1 309 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 MFSD3Q96ES6 412 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 POLMQ9NP87 494 aaPredicted RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 OLA1Q9NTK5 396 aaKnown RBP9.82□□□□□ -0.84
UBR4-201ENST00000375218 COL15A1P39059 1388 aa9.82□□□□□ -0.84
UBR4-201ENST00000375218 GABRDO14764 452 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 TYRP1P17643 537 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 ALAS2P22557 587 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 CCNA1P78396 465 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 FAM196AQ6ZSG2 479 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 LRRTM3Q86VH5 581 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 CDC26Q8NHZ8 85 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 PIGSQ96S52 555 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 YME1L1Q96TA2 773 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 NAA15Q9BXJ9 866 aaKnown RBP9.81□□□□□ -0.84
UBR4-201ENST00000375218 BCL9O00512 1426 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 SGK1O00141 431 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 TSC22D2O75157 780 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 MICALCLQ6ZW33 695 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 RUFY3Q7L099 469 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 PPFIBP1Q86W92 1011 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 TPCN2Q8NHX9 752 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 TEKT4Q8WW24 435 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 E2F3O00716 465 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 PLSCR1O15162 318 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 NXNQ6DKJ4 435 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 RNF180Q86T96 592 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 ARMC2Q8NEN0 867 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 C16orf45Q96MC5 204 aaPredicted RBP9.81□□□□□ -0.84
UBR4-201ENST00000375218 SPON2Q9BUD6 331 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 ATP11BQ9Y2G3 1177 aa9.81□□□□□ -0.84
UBR4-201ENST00000375218 KRT87PA6NCN2 255 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CAPN14A8MX76 684 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 NDUFAB1O14561 156 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms