RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 ITSN1Q15811 1721 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 FECHP22830 423 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ERCC5P28715 1186 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 KAZNQ674X7 775 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 MICU3Q86XE3 530 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 NHEJ1Q9H9Q4 299 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 LRRC4CQ9HCJ2 640 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 TBCCD1Q9NVR7 557 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 DIP2CQ9Y2E4 1556 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 RASA4BC9J798 803 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 MATN2O00339 956 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 RASA4O43374 803 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 BUB1O43683 1085 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 KRT36O76013 467 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 DDHD2O94830 711 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 COPB1P53618 953 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 MYO1HQ8N1T3 1032 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 ATXN2LQ8WWM7 1075 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PARVBQ9HBI1 364 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 LZTS1Q9Y250 596 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 KIF28PB7ZC32 967 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PGM3O95394 542 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 OCRLQ01968 901 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 MORC3Q14149 939 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PPP2R2DQ66LE6 453 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 GAB3Q8WWW8 586 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 DBNDD2Q9BQY9 259 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 TBC1D10AQ9BXI6 508 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 HPSEQ9Y251 543 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 NOTOA8MTQ0 251 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 TXKP42681 527 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 TNNC1P63316 161 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 WASHC5Q12768 1159 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 GSTA3Q16772 222 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 WASHC2DQ5SRD0 308 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PHLDB2Q86SQ0 1253 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 NRG4Q8WWG1 115 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 SKA1Q96BD8 255 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 IFIH1Q9BYX4 1025 aaKnown RBP11.44□□□□□ -0.58
TRERF1-203ENST00000372917 THAP9Q9H5L6 903 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 PTTG2Q9NZH5 202 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
TRERF1-203ENST00000372917 FAM170AA1A519 330 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 ALDH2P05091 517 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 CYP2C9P11712 490 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 GFPT1Q06210 699 aaPredicted RBP11.43□□□□□ -0.58
TRERF1-203ENST00000372917 RBM44Q6ZP01 1051 aaKnown RBP11.43□□□□□ -0.58
TRERF1-203ENST00000372917 DCLK2Q8N568 766 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 ANKRD42Q8N9B4 389 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 DDHD1Q8NEL9 900 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 AZI2Q9H6S1 392 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 KANSL1LA0AUZ9 987 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 FBXO21O94952 628 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 SLCO1A2P46721 670 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PCYT1AP49585 367 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PRKG1Q13976 671 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PPP2R5BQ15173 497 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 RSPH3Q86UC2 560 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 FAM186BQ8IYM0 893 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 IL1RAPL1Q9NZN1 696 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PABPC4LP0CB38 370 aaKnown RBP11.43□□□□□ -0.58
TRERF1-203ENST00000372917 CASP1P29466 404 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PHBP35232 272 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PPIDQ08752 370 aaKnown RBP11.43□□□□□ -0.58
TRERF1-203ENST00000372917 PARP6Q2NL67 630 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 RFX8Q6ZV50 586 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 ARHGAP24Q8N264 748 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 TTC39CQ8N584 583 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 GIT1Q9Y2X7 761 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 SPATA31D1Q6ZQQ2 1576 aa11.43□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF213O14771 459 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 STAMBPO95630 424 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 LDHBP07195 334 aaKnown RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CYP21A2P08686 494 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 SLC16A2P36021 539 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 TUBA1BP68363 451 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 SLC34A1Q06495 639 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms