RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CDC25CP30307 473 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 KRT9P35527 623 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 DLK2Q6UY11 383 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 NSUN6Q8TEA1 469 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 LUC7L2Q9Y383 392 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 CLNS1AP54105 237 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 CCDC40Q4G0X9 1142 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 VWA3BQ502W6 1294 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 ZCWPW2Q504Y3 356 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 NLRX1Q86UT6 975 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 TMTC1Q8IUR5 882 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 ZC3H15Q8WU90 426 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 SGSM3Q96HU1 749 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 RUFY1Q96T51 708 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 FGFBP2Q9BYJ0 223 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 DHX15O43143 795 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 PRPF6O94906 941 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 CPP00450 1065 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 NR3C2P08235 984 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 C2orf54Q08AI8 447 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 IFT88Q13099 833 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 C1orf186Q6ZWK4 172 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 NDST4Q9H3R1 872 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 ABHD10Q9NUJ1 306 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 CCDC189A1A4V9 331 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 MAFGO15525 162 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 EPHX2P34913 555 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 SEC24CP53992 1094 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 ITGB3BPQ13352 177 aaPredicted RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 EDRF1Q3B7T1 1238 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 MIIPQ5JXC2 388 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 MYCT1Q8N699 235 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 IQCDQ96DY2 449 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 CETN3O15182 167 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 IPO7O95373 1038 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 RSPH10BP0C881 870 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 CDR1P51861 262 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 NEDD9Q14511 834 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 KNOP1Q1ED39 458 aaKnown RBP10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 GADL1Q6ZQY3 521 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 ANKRD13AQ8IZ07 590 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 OR8K1Q8NGG5 319 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 GPRASP2Q96D09 838 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 TBC1D31Q96DN5 1066 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 ERGIC2Q96RQ1 377 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 PARVGQ9HBI0 331 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 CAPN11Q9UMQ6 739 aa10.9□□□□□ -0.66
PRPF38B-203ENST00000370025 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.67
PRPF38B-203ENST00000370025 TTC26A0AVF1 554 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 ZBTB39O15060 712 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 KIF1CO43896 1103 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CLSTN1O94985 981 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 GCNT3O95395 438 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 KRT76Q01546 638 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 PPATQ06203 517 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 ADAM9Q13443 819 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CYP26C1Q6V0L0 522 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 STXBP4Q6ZWJ1 553 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 COG1Q8WTW3 980 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 PURBQ96QR8 312 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 ELP3Q9H9T3 547 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 OLFML3Q9NRN5 406 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CYP39A1Q9NYL5 469 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 SFNP31947 248 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 QARSP47897 775 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 JAK3P52333 1124 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 GUCY1A3Q02108 690 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 APBA1Q02410 837 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CEP85LQ5SZL2 805 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 TRMT1LQ7Z2T5 733 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 ARL8AQ96BM9 186 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CDCA5Q96FF9 252 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 SMARCAL1Q9NZC9 954 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 EPM2AIP1Q7L775 607 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 MIEF2Q96C03 454 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 A1CFQ9NQ94 594 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-203ENST00000370025 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms