RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 ZNF653Q96CK0 615 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 C18orf8Q96DM3 657 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 HIC2Q96JB3 615 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 HEMGNQ9BXL5 484 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 EPHB6O15197 1021 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 CHRNA3P32297 505 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 ERMARDQ5T6L9 678 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
RAP1A-202ENST00000369709 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 FBXO25Q8TCJ0 367 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
RAP1A-202ENST00000369709 LTKP29376 864 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 CPA2P48052 419 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 PDIA6Q15084 440 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 TTC17Q96AE7 1141 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 RXFP1Q9HBX9 757 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 MAGEA13PA6NCF6 341 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 EPHB2P29323 1055 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 RFC1P35251 1148 aaPredicted RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 PGM1P36871 562 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 CDK17Q00537 523 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 CWF19L1Q69YN2 538 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 TRIM55Q9BYV6 548 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 Q9H521 79 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 PPARGC1AQ9UBK2 798 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 KYNUQ16719 465 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 NMD3Q96D46 503 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 USP17L3A6NCW0 530 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 USP17L4A6NCW7 530 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 CYP2D6P10635 497 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 HSPA6P17066 643 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 GALCP54803 685 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 USP4Q13107 963 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 THOC5Q13769 683 aaKnown RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 USP17L1Q7RTZ2 530 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 RASSF3Q86WH2 238 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
RAP1A-202ENST00000369709 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■□□□ 11.7
RAP1A-202ENST00000369709 TMOD2Q9NZR1 351 aa13.28□□□□□ -0.28
RAP1A-202ENST00000369709 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 SLC9A1P19634 815 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 NCALDP61601 193 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 MYL7Q01449 175 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 GALNT17Q6IS24 598 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 PPM1KQ8N3J5 372 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 GUF1Q8N442 669 aaKnown RBP13.27□□□□□ -0.28
RAP1A-202ENST00000369709 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 COA7Q96BR5 231 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 SEMA6BQ9H3T3 888 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.28
RAP1A-202ENST00000369709 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 FAM210AQ96ND0 272 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 PIGSQ96S52 555 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 METTL14Q9HCE5 456 aaKnown RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 E9PMD0 336 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 ARFIP2P53365 341 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 AP2B1P63010 937 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 KRT17Q04695 432 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 FAM186BQ8IYM0 893 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 MREGQ8N565 214 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 RAD54LQ92698 747 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 DDX17Q92841 729 aaKnown RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 C9orf72Q96LT7 481 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 DNAJC12Q9UKB3 198 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 PCDHA6Q9UN73 950 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 PCDHA8Q9Y5H6 950 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 GOLGA8SH3BPF8 625 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 GOLGA8MH3BSY2 632 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 EPHB1P54762 984 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 BTKQ06187 659 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 SMC1BQ8NDV3 1235 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 PRPF31Q8WWY3 499 aaKnown RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 TMEM260Q9NX78 707 aa13.27□□□□□ -0.29
RAP1A-202ENST00000369709 TTC7AQ9ULT0 858 aaPredicted RBP13.27□□□□□ -0.29
RAP1A-202ENST00000369709 DIS3Q9Y2L1 958 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms