RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 TRIM62Q9BVG3 475 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ASNSD1Q9NWL6 643 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 MSH2P43246 934 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 RWDD2BP57060 319 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ZNF543Q08ER8 600 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ENC1O14682 589 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 EPHB4P54760 987 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 IL9RQ01113 521 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ALKBH5Q6P6C2 394 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 AGBL3Q8NEM8 1001 aa11.1□□□□□ -0.63
SPTAN1-201ENST00000358161 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 TSTA3Q13630 321 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 ADAM22Q9P0K1 906 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 MMP14P50281 582 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 ATP2C1P98194 919 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SATB1Q01826 763 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 GABPB1Q06547 395 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 IQCB1Q15051 598 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SLC25A27O95847 323 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 PDIA5Q14554 519 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.09□□□□□ -0.632e-19■□□□□ 11.2
SPTAN1-201ENST00000358161 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 LGALS16A8MUM7 142 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SLMAPQ14BN4 828 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SLC15A2Q16348 729 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 LRRC31Q6UY01 552 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SPATS2Q86XZ4 545 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 HSPH1Q92598 858 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 RBM41Q96IZ5 413 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SMYD2Q9NRG4 433 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 MAP3K20Q9NYL2 800 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 PPLO60437 1756 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 HPCAL4Q9UM19 191 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 PAMP19021 973 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 SREBF2Q12772 1141 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 CDO1Q16878 200 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 FBXO33Q7Z6M2 555 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 FAM71BQ8TC56 605 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 DHX38Q92620 1227 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 GGA3Q9NZ52 723 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 FAM8A1Q9UBU6 413 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 NRBP1Q9UHY1 535 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 TLK1Q9UKI8 766 aa11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-201ENST00000358161 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 EYA4O95677 639 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 CETPP11597 493 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SCN4BQ8IWT1 228 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 UBE4BO95155 1302 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 FTCDO95954 541 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 GCLMP48507 274 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 STAT5BP51692 787 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 MFAP3LO75121 409 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 RECQLP46063 649 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 HDLBPQ00341 1268 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 TMEM270Q6UE05 265 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 ACRBPQ8NEB7 543 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 EPB41L5Q9HCM4 733 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 PRCPP42785 496 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 MXD4Q14582 209 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SMARCAD1Q9H4L7 1026 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 PMLP29590 882 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 PCK1P35558 622 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 TRIM72Q6ZMU5 477 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SRBD1Q8N5C6 995 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 ATP6V1E2Q96A05 226 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 NUDCD1Q96RS6 583 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 TDP2O95551 362 aa11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 GMPSP49915 693 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-201ENST00000358161 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms