RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 VPS39Q96JC1 886 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TMEM247A6NEH6 219 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 PSMD14O00487 310 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ATP13A5Q4VNC0 1218 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 BTNL9Q6UXG8 535 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 GPR141Q7Z602 305 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CCDC126Q96EE4 140 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 NAIPQ13075 1403 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 MTTPP55157 894 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM25Q14258 630 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CCNJLQ8IV13 435 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 EPB41L5Q9HCM4 733 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ZNF330Q9Y3S2 320 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ADGRL3Q9HAR2 1447 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 DNAJB7Q7Z6W7 309 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ZNF589Q86UQ0 364 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ALG1Q9BT22 464 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 DNAJB4Q9UDY4 337 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TRPC5Q9UL62 973 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 NR1H2P55055 460 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TNFAIP8L3Q5GJ75 292 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 JADE1Q6IE81 842 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM72Q6ZMU5 477 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 AP3S1Q92572 193 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 OSBPL10Q9BXB5 764 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 JAK1P23458 1154 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 AADATQ8N5Z0 425 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TOR1AIP2Q8NFQ8 470 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SYN2Q92777 582 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 LRRC39Q96DD0 335 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ANKRD36BP1Q96IX9 119 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CAPN15O75808 1086 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ZBED1O96006 694 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TNFAIP2Q03169 654 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SVOPQ8N4V2 548 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 GLS2Q9UI32 602 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SYNPO2Q9UMS6 1093 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TLDC2A0PJX2 215 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 METTL21EPA6NDL7 271 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KRT25Q7Z3Z0 450 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CENPTQ96BT3 561 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CINPQ9BW66 212 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KLHL33A6NCF5 533 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 C10orf107Q8IVU9 208 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RBBP8NLQ8NC74 664 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RWDD2AQ9UIY3 292 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TXNDC11Q6PKC3 985 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SYTL5Q8TDW5 730 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 DACH2Q96NX9 599 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 BICC1Q9H694 974 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SLC12A1Q13621 1099 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RCN1Q15293 331 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TMEM67Q5HYA8 995 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KRT35Q92764 455 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 PRELID1Q9Y255 219 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TNFRSF8P28908 595 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 EPM2AIP1Q7L775 607 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 PARD3BQ8TEW8 1205 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SERPINB12Q96P63 405 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KIFC1Q9BW19 673 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CYP26B1Q9NR63 512 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SPAG16Q8N0X2 631 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 NECTIN2Q92692 538 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CAVIN3Q969G5 261 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KIFC2Q96AC6 838 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 DDAH1O94760 285 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 KIAA0408Q6ZU52 694 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CLHC1Q8NHS4 586 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SNX19Q92543 992 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CCNB1IP1Q9NPC3 277 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SF3B1O75533 1304 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SSU72P8A0A1W2PR75 194 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 NPR3P17342 541 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 MDH1P40925 334 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CDK17Q00537 523 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 LHFPL3Q86UP9 236 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CDV3Q9UKY7 258 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 HSPA4LO95757 839 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RORAP35398 523 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RPL5P46777 297 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 MMRN1Q13201 1228 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 B3GNT6Q6ZMB0 384 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 LEMD2Q8NC56 503 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 POF1BQ8WVV4 589 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 CCT7Q99832 543 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SENP3Q9H4L4 574 aaPredicted RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 IL20Q9NYY1 176 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 A0A087WXM4 84 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 DR1Q01658 176 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TYSND1Q2T9J0 566 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 SPANXN2Q5MJ10 180 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 HECTD3Q5T447 861 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RWDD4Q6NW29 188 aaKnown RBP4.97□□□□□ -1.61
SYNE2-203ENST00000357395 ZNF554Q86TJ5 538 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 RSAD2Q8WXG1 361 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.97□□□□□ -1.613e-8■■■■■ 70.6
SYNE2-203ENST00000357395 PRPF18Q99633 342 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms