RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CTAGE1Q96RT6 745 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 LBHD1Q9BQE6 289 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRPV6Q9H1D0 765 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM60Q9H2L4 133 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 HIPK3Q9H422 1215 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 ZSCAN16Q9H4T2 348 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRMT13Q9NUP7 481 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 GABBR1Q9UBS5 961 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 CEP131Q9UPN4 1083 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 SAMM50Q9Y512 469 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 WASF2Q9Y6W5 498 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MORC2Q9Y6X9 1032 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 A0A1W2PPC1 479 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 EML1O00423 815 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SLC26A4O43511 780 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 LYPLA2O95372 231 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 P4HBP07237 508 aaKnown RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SYN1P17600 705 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ATP2B1P20020 1258 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 BMP8BP34820 402 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 MAGEA10P43363 369 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TOB1P50616 345 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 CHMP4BP1P59074 171 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PSMC5P62195 406 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ATP2C1P98194 919 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 FPGSQ05932 587 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF174Q15697 407 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 UGCGQ16739 394 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 C4orf48Q5BLP8 95 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PPP2R2DQ66LE6 453 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SWSAP1Q6NVH7 229 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TAF2Q6P1X5 1199 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 RPAINQ86UA6 219 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM199Q8N511 208 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ERMNQ8TAM6 284 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 FAM174AQ8TBP5 190 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 GJA10Q969M2 543 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 GDF15Q99988 308 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 RAB34Q9BZG1 259 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TUBE1Q9UJT0 475 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PCDHB6Q9Y5E3 794 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SCN5AQ14524 2016 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF862O60290 1169 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PFKMP08237 780 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 CYP2C9P11712 490 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 INSRRP14616 1297 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SELPP16109 830 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 MUTP22033 750 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 QARSP47897 775 aaKnown RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 XKR3Q5GH77 459 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ARL6IP4Q66PJ3 421 aaKnown RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 HAUS3Q68CZ6 603 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 MFSD5Q6N075 450 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PSRC1Q6PGN9 363 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 RSPH3Q86UC2 560 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 C4orf19Q8IY42 314 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 CKAP2LQ8IYA6 745 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 C4orf32Q8N8J7 132 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 RETREG2Q8NC44 543 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 ARMC2Q8NEN0 867 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 LXNQ9BS40 222 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 POLR3CQ9BUI4 534 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PPP1R12CQ9BZL4 782 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 WNT8AQ9H1J5 351 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PRO3102Q9H379 93 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 RNPEPQ9H4A4 650 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
CNOT4-202ENST00000356162 TUFT1Q9NNX1 390 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 NRBP2Q9NSY0 501 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 SETD4Q9NVD3 440 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 PCDHA12Q9UN75 941 aa4.45□□□□□ -1.7
CNOT4-202ENST00000356162 MICAL3Q7RTP6 2002 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 SMIM35A0A1B0GVV1 85 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 ZBTB42B2RXF5 422 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 MAGEB2O15479 319 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 TREHO43280 583 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 C22orf31O95567 290 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 ATP4AP20648 1035 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 CYP2C18P33260 490 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 TXKP42681 527 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF200P98182 395 aaPredicted RBP4.44□□□□□ -1.7
CNOT4-202ENST00000356162 FAM26DQ5JW98 314 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 RUFY4Q6ZNE9 571 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 LRRC8DQ7L1W4 858 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 LINC01465Q8N7H1 131 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 BANK1Q8NDB2 785 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 PPP1R13LQ8WUF5 828 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 BADQ92934 168 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 DYDC2Q96IM9 177 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 CDK15Q96Q40 435 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 EIF2AK1Q9BQI3 630 aaKnown RBP4.44□□□□□ -1.7
CNOT4-202ENST00000356162 JPH2Q9BR39 696 aaPredicted RBP4.44□□□□□ -1.7
CNOT4-202ENST00000356162 NIFKQ9BYG3 293 aaKnown RBP4.44□□□□□ -1.7
CNOT4-202ENST00000356162 ZSWIM4Q9H7M6 989 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 IL23AQ9NPF7 189 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 PCDHA2Q9Y5H9 948 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 KDM3AQ9Y4C1 1321 aa4.44□□□□□ -1.7
CNOT4-202ENST00000356162 GAS2O43903 313 aaKnown RBP4.44□□□□□ -1.7
CNOT4-202ENST00000356162 STBD1O95210 358 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms