RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 STK17AQ9UEE5 414 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 COBLO75128 1261 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 RPS6KA3P51812 740 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 MTMR1Q13613 665 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SNCBQ16143 134 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 ACRBPQ8NEB7 543 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SNX29Q8TEQ0 813 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 POLR3CQ9BUI4 534 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 PORCNQ9H237 461 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SPATA31C1P0DKV0 1188 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 RPA1P27694 616 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 NLRP12P59046 1061 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 CCNA1P78396 465 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 CNNM4Q6P4Q7 775 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 STAMBPL1Q96FJ0 436 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 NT5C3AQ9H0P0 336 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 CDC23Q9UJX2 597 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ZNF236Q9UL36 1845 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TTC36A6NLP5 189 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 EML1O00423 815 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MEFVO15553 781 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 KIF5CO60282 957 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MYCLP12524 364 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MUTP22033 750 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 SCNN1BP51168 640 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TBC1D25Q3MII6 688 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ANKRD13CQ8N6S4 541 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TRIML1Q8N9V2 468 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MMP19Q99542 508 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 HSD17B14Q9BPX1 270 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TPX2Q9ULW0 747 aaKnown RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 GAS7O60861 476 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MED24O75448 989 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ICAM3P32942 547 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 MFSD4BQ5TF39 518 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ARL8AQ96BM9 186 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 GSDMAQ96QA5 445 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 UNC45AQ9H3U1 944 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 TRIM10Q9UDY6 481 aa11.04□□□□□ -0.64
SYNE1-203ENST00000354674 ADD3Q9UEY8 706 aaKnown RBP11.04□□□□□ -0.64
SYNE1-203ENST00000354674 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 GOLGA6BA6NDN3 693 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 EIF3HO15372 352 aaKnown RBP eCLIP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 FCER1AP12319 257 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 TM4SF4P48230 202 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 RWDD2BP57060 319 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 MORC3Q14149 939 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 DNAJC14Q6Y2X3 702 aaPredicted RBP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 NLRX1Q86UT6 975 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 RAD54LQ92698 747 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 MAN1B1Q9UKM7 699 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 BMP6P22004 513 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 CCT6AP40227 531 aaKnown RBP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 AFMP43652 599 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 NCAPHQ15003 741 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 STXBP2Q15833 593 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 SND1Q7KZF4 910 aaKnown RBP eCLIP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 KCNK18Q7Z418 384 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 SENP7Q9BQF6 1050 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
SYNE1-203ENST00000354674 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 TUFT1Q9NNX1 390 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 KCND1Q9NSA2 647 aa11.03□□□□□ -0.64
SYNE1-203ENST00000354674 NFASCO94856 1347 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 GOLGA6L7A0A1B0GV03 622 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 STRNO43815 780 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 BUB1BO60566 1050 aaPredicted RBP11.02□□□□□ -0.64
SYNE1-203ENST00000354674 ATP9AO75110 1047 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 CUL4BQ13620 913 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 KCTD2Q14681 263 aa11.02□□□□□ -0.64
SYNE1-203ENST00000354674 EPHA7Q15375 998 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms