RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CFAP47Q6ZTR5 3102 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 DCNP07585 359 aaKnown RBP18.06■□□□□ 0.48
DDX55-202ENST00000354291 SLC26A2P50443 739 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 TTC22Q5TAA0 569 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 HELQQ8TDG4 1101 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 RSAD2Q8WXG1 361 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 IGSF9Q9P2J2 1179 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 WNT16Q9UBV4 365 aa18.06■□□□□ 0.48
DDX55-202ENST00000354291 GPR32O75388 356 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 SP9P0CG40 484 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 ZNF484Q5JVG2 852 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 TRMT1LQ7Z2T5 733 aaKnown RBP18.05■□□□□ 0.48
DDX55-202ENST00000354291 MXRA8Q9BRK3 442 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 ZBP1Q9H171 429 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 TBC1D17Q9HA65 648 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 ZFHX4Q86UP3 3567 aa18.05■□□□□ 0.48
DDX55-202ENST00000354291 DDX39AO00148 427 aaKnown RBP18.04■□□□□ 0.48
DDX55-202ENST00000354291 SART3Q15020 963 aaKnown RBP18.04■□□□□ 0.48
DDX55-202ENST00000354291 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
DDX55-202ENST00000354291 CKAP2LQ8IYA6 745 aa18.04■□□□□ 0.48
DDX55-202ENST00000354291 RUFY2Q8WXA3 655 aa18.04■□□□□ 0.48
DDX55-202ENST00000354291 SPZ1Q9BXG8 430 aa18.04■□□□□ 0.48
DDX55-202ENST00000354291 SFXN1Q9H9B4 322 aa18.04■□□□□ 0.48
DDX55-202ENST00000354291 NFASCO94856 1347 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 LAMA4Q16363 1823 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX55-202ENST00000354291 ATG7O95352 703 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 CTSAP10619 480 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
DDX55-202ENST00000354291 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
DDX55-202ENST00000354291 ITGB3BPQ13352 177 aaPredicted RBP18.03■□□□□ 0.48
DDX55-202ENST00000354291 GIT2Q14161 759 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 NONOQ15233 471 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX55-202ENST00000354291 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 PDXDC2PQ6P474 469 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 TMEM173Q86WV6 379 aaPredicted RBP18.03■□□□□ 0.48
DDX55-202ENST00000354291 C1orf210Q8IVY1 113 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 CTCFLQ8NI51 663 aaPredicted RBP18.03■□□□□ 0.48
DDX55-202ENST00000354291 MYL10Q9BUA6 226 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 SIT1Q9Y3P8 196 aa18.03■□□□□ 0.48
DDX55-202ENST00000354291 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 KLRC2P26717 231 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 NLRP11P59045 1033 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 SWSAP1Q6NVH7 229 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 RALYLQ86SE5 291 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 SLC44A3Q8N4M1 653 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 EVPLQ92817 2033 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 ZNF668Q96K58 619 aaPredicted RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 MRPL9Q9BYD2 267 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
DDX55-202ENST00000354291 ZNF302Q9NR11 478 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 IRAK3Q9Y616 596 aa18.02■□□□□ 0.48
DDX55-202ENST00000354291 COL1A2P08123 1366 aa18.02■□□□□ 0.47
DDX55-202ENST00000354291 CHD6Q8TD26 2715 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 IGKV6D-21A0A0A0MT36 114 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 KINO60870 393 aaKnown RBP18.01■□□□□ 0.47
DDX55-202ENST00000354291 C22orf31O95567 290 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 CCNE2O96020 404 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 KIF5BP33176 963 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 POLGP54098 1239 aaPredicted RBP18.01■□□□□ 0.47
DDX55-202ENST00000354291 ATXN1P54253 815 aaKnown RBP18.01■□□□□ 0.47
DDX55-202ENST00000354291 ST3GAL2Q16842 350 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 ABHD15Q6UXT9 468 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 CCDC60Q8IWA6 550 aaPredicted RBP18.01■□□□□ 0.47
DDX55-202ENST00000354291 SUMF1Q8NBK3 374 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 CHD8Q9HCK8 2581 aa18.01■□□□□ 0.47
DDX55-202ENST00000354291 CACNA1IQ9P0X4 2223 aa18■□□□□ 0.47
DDX55-202ENST00000354291 MAP1BP46821 2468 aaKnown RBP18■□□□□ 0.47
DDX55-202ENST00000354291 A0A0U1RQF3 1178 aa18■□□□□ 0.47
DDX55-202ENST00000354291 N4BP1O75113 896 aaKnown RBP18■□□□□ 0.47
DDX55-202ENST00000354291 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
DDX55-202ENST00000354291 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
DDX55-202ENST00000354291 ATP4AP20648 1035 aa18■□□□□ 0.47
DDX55-202ENST00000354291 FGFR4P22455 802 aa18■□□□□ 0.47
DDX55-202ENST00000354291 CLCN3P51790 818 aa18■□□□□ 0.47
DDX55-202ENST00000354291 LONRF3Q496Y0 759 aa18■□□□□ 0.47
DDX55-202ENST00000354291 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
DDX55-202ENST00000354291 GPR152Q8TDT2 470 aa18■□□□□ 0.47
DDX55-202ENST00000354291 IGSF21Q96ID5 467 aa18■□□□□ 0.47
DDX55-202ENST00000354291 LZTS2Q9BRK4 669 aa18■□□□□ 0.47
DDX55-202ENST00000354291 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
DDX55-202ENST00000354291 IL25Q9H293 177 aa18■□□□□ 0.47
DDX55-202ENST00000354291 SDHBP21912 280 aa17.99■□□□□ 0.47
DDX55-202ENST00000354291 EIF4BP23588 611 aaKnown RBP17.99■□□□□ 0.47
DDX55-202ENST00000354291 CHMLP26374 656 aa17.99■□□□□ 0.47
DDX55-202ENST00000354291 SMARCA1P28370 1054 aa17.99■□□□□ 0.47
DDX55-202ENST00000354291 CEP55Q53EZ4 464 aa17.99■□□□□ 0.47
DDX55-202ENST00000354291 VARS2Q5ST30 1063 aaKnown RBP17.99■□□□□ 0.47
DDX55-202ENST00000354291 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
DDX55-202ENST00000354291 ZNF598Q86UK7 904 aaKnown RBP17.99■□□□□ 0.47
DDX55-202ENST00000354291 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms