RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 TARBP2Q15633 366 aaKnown RBP13.38□□□□□ -0.27
TUBD1-203ENST00000346141 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 P2RX5Q93086 422 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 PPP1R16BQ96T49 567 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 ADAM2Q99965 735 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
TUBD1-203ENST00000346141 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
TUBD1-203ENST00000346141 MRPL42Q9Y6G3 142 aaKnown RBP13.38□□□□□ -0.27
TUBD1-203ENST00000346141 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 C9IYK1 514 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 TBX3O15119 743 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 NCK2O43639 380 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 SLC37A4O43826 429 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 MGEA5O60502 916 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
TUBD1-203ENST00000346141 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 PPP2R5CQ13362 524 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 ME3Q16798 604 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 LRRC71Q8N4P6 559 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 KCNMB3Q9NPA1 279 aa13.37□□□□□ -0.27
TUBD1-203ENST00000346141 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-203ENST00000346141 GRM6O15303 877 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 MMP1P03956 469 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 KCNA5P22460 613 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 EIF4BP23588 611 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 NEK4P51957 841 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 PSMC5P62195 406 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 COL19A1Q14993 1142 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 LEXMQ3ZCV2 418 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 PAN2Q504Q3 1202 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 NECAB3Q96P71 396 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 ELAC1Q9H777 363 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 STBD1O95210 358 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 KRT2P35908 639 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 DNM2P50570 870 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 GPC3P51654 580 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 FAM189BP81408 668 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 DSC3Q14574 896 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 MTERF2Q49AM1 385 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 JPH2Q9BR39 696 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-203ENST00000346141 ATP6V0A4Q9HBG4 840 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 PLAGL2Q9UPG8 496 aa13.36□□□□□ -0.27
TUBD1-203ENST00000346141 TCF20Q9UGU0 1960 aaKnown RBP13.35□□□□□ -0.27
TUBD1-203ENST00000346141 IGKV6-21A0A0C4DH24 114 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 HOXA2O43364 376 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 MARCH6O60337 910 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 LARGE1O95461 756 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-203ENST00000346141 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
TUBD1-203ENST00000346141 GATMP50440 423 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
TUBD1-203ENST00000346141 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
TUBD1-203ENST00000346141 AAASQ9NRG9 546 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 PPME1Q9Y570 386 aa13.35□□□□□ -0.27
TUBD1-203ENST00000346141 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 EML1O00423 815 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 DTNBO60941 627 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-203ENST00000346141 ITGB1P05556 798 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
TUBD1-203ENST00000346141 NR5A1Q13285 461 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 TRIM29Q14134 588 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 CSPP1Q1MSJ5 1256 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 ANO5Q75V66 913 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 HAS1Q92839 578 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
TUBD1-203ENST00000346141 GCOM2Q9BZD3 368 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-203ENST00000346141 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms