RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 HDLBPQ00341 1268 aaKnown RBP18.73■□□□□ 0.59
SMAD4-201ENST00000342988 STX12Q86Y82 276 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 CCT7Q99832 543 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 DLGAP3O95886 979 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 HES6Q96HZ4 224 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 HIC1Q14526 733 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 DDIASQ8IXT1 998 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 SMIM31A0A1B0GVY4 71 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 RNF103O00237 685 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 GTPBP6O43824 516 aaPredicted RBP18.73■□□□□ 0.59
SMAD4-201ENST00000342988 DDAH1O94760 285 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 SARM1Q6SZW1 724 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 MDM1Q8TC05 714 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 CMTM5Q96DZ9 223 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 H0Y3Z8 333 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 DAB2IPQ5VWQ8 1189 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 PRUNE1Q86TP1 453 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 LAMB3Q13751 1172 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 MYH15Q9Y2K3 1946 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 PSMC3P17980 439 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 NAALADL2Q58DX5 795 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 CNOT6LQ96LI5 555 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 CHMLP26374 656 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 MAPRE1Q15691 268 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 TRIM16LQ309B1 348 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 SPATA1Q5VX52 437 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 SLC25A24Q6NUK1 477 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 ESRP1Q6NXG1 681 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 DDX56Q9NY93 547 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 MAD2L2Q9UI95 211 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 KITP10721 976 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 CCDC130P13994 396 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 PTPROQ16827 1216 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 G3BP2Q9UN86 482 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 NINQ8N4C6 2090 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 CCDC88CQ9P219 2028 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 A0A0B4J269 797 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 PSMA2P25787 234 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 TUBB3Q13509 450 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 MEIS3Q99687 375 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 DDX50Q9BQ39 737 aaKnown RBP18.72■□□□□ 0.59
SMAD4-201ENST00000342988 ING3Q9NXR8 418 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 MYO1CO00159 1063 aa18.72■□□□□ 0.59
SMAD4-201ENST00000342988 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
SMAD4-201ENST00000342988 NLRP11P59045 1033 aaKnown RBP18.71■□□□□ 0.59
SMAD4-201ENST00000342988 E2F4Q16254 413 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 RBM41Q96IZ5 413 aaKnown RBP18.71■□□□□ 0.59
SMAD4-201ENST00000342988 ACCSQ96QU6 501 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 DHTKD1Q96HY7 919 aaPredicted RBP18.71■□□□□ 0.59
SMAD4-201ENST00000342988 DTNAQ9Y4J8 743 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 ICE2Q659A1 982 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 C16orf89Q6UX73 402 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 SERPING1P05155 500 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 BATF3Q9NR55 127 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 IMPAD1Q9NX62 359 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 MLNP12872 115 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 BLIDQ8IZY5 108 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 PANX2Q96RD6 677 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 AP4S1Q9Y587 144 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 CENPXA8MT69 81 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 SPATA16Q9BXB7 569 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 ARIH1Q9Y4X5 557 aaPredicted RBP18.71■□□□□ 0.59
SMAD4-201ENST00000342988 JAK1P23458 1154 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 PCYOX1LQ8NBM8 494 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 SLC24A3Q9HC58 644 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 APPL1Q9UKG1 709 aa18.71■□□□□ 0.59
SMAD4-201ENST00000342988 ARL4DP49703 201 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 PRKG1Q13976 671 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 TRMT44Q8IYL2 757 aaKnown RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 NARS2Q96I59 477 aaKnown RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 ECDO95905 644 aaPredicted RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 RASGRF1Q13972 1273 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 CDC37Q16543 378 aaPredicted RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 NCOA1Q15788 1441 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 IQCA1LA6NCM1 817 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 GADL1Q6ZQY3 521 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 ZNF496Q96IT1 587 aaPredicted RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 PPP1R2P1Q96PQ5 205 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 APOL6Q9BWW8 343 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 SLCO1A2P46721 670 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 ADCY1Q08828 1119 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 DDB1Q16531 1140 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 HSPH1Q92598 858 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 DCUN1D1Q96GG9 259 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 MAPKAPK2P49137 400 aa18.7■□□□□ 0.58
SMAD4-201ENST00000342988 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 PDCD6IPQ8WUM4 868 aaKnown RBP18.7■□□□□ 0.58
SMAD4-201ENST00000342988 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms