RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 SLC26A2P50443 739 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 RNASE9P60153 205 aaKnown RBP9.1□□□□□ -0.95
HMGB1-203ENST00000341423 GFPT1Q06210 699 aaPredicted RBP9.1□□□□□ -0.95
HMGB1-203ENST00000341423 FOPNLQ96NB1 174 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 PIGSQ96S52 555 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 TNMDQ9H2S6 317 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ATRNO75882 1429 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 DDHD2O94830 711 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 S100BP04271 92 aaPredicted RBP9.1□□□□□ -0.95
HMGB1-203ENST00000341423 JUPP14923 745 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 VCAM1P19320 739 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 HNF1BP35680 557 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 PTK2BQ14289 1009 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ARHGAP18Q8N392 663 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 GOLGA6L3A6NEY3 463 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 SGSM2O43147 1006 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ATP5BP06576 529 aaKnown RBP9.1□□□□□ -0.95
HMGB1-203ENST00000341423 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 TAX1BP1Q86VP1 789 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ACCSQ96QU6 501 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ZNF576Q9H609 170 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 ZFP14Q9HCL3 533 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
HMGB1-203ENST00000341423 H0YGN5 161 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PTPRAP18433 802 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 DSG3P32926 999 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CYP2J2P51589 502 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CCDC122Q5T0U0 273 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 MFSD4BQ5TF39 518 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 TEKT4Q8WW24 435 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CORO1BQ9BR76 489 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 DYRK3O43781 588 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 YEATS4O95619 227 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 NDUFB10O96000 172 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CYP2C18P33260 490 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 RILPL1Q5EBL4 403 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PTCRAQ6ISU1 281 aaPredicted RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 GIMAP6Q6P9H5 292 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 Q6ZUG5 572 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CHPFQ8IZ52 775 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 NRSN1Q8IZ57 195 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 BLIDQ8IZY5 108 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 HAUS1Q96CS2 278 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 HEXIM2Q96MH2 286 aaKnown RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ADAM2Q99965 735 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ISCA1Q9BUE6 129 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 CSRNP2Q9H175 543 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 LTBP3Q9NS15 1303 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 RASSF10A6NK89 507 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 AKR1B10O60218 316 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 SMPD1P17405 629 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ADORA1P30542 326 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 MAPK9P45984 424 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PSMC5P62195 406 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 KCNA10Q16322 511 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 C11orf74Q86VG3 221 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ATCAYQ86WG3 371 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 RTP3Q9BQQ7 232 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ATP5JP18859 108 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 SPAG1Q07617 926 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PPP2R5CQ13362 524 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 HADHQ16836 314 aaKnown RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 TRIM60Q495X7 471 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 COL13A1Q5TAT6 717 aaPredicted RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 FAM171A1Q5VUB5 890 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ANKRD44Q8N8A2 993 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
HMGB1-203ENST00000341423 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 ABCA9Q8IUA7 1624 aa9.09□□□□□ -0.95
HMGB1-203ENST00000341423 GOLGA6L10A6NI86 522 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 LGR5O75473 907 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 ASGR1P07306 291 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 SCNN1BP51168 640 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 SLFN5Q08AF3 891 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 TTC38Q5R3I4 469 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 EFCAB12Q6NXP0 572 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 GJD3Q8N144 294 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
HMGB1-203ENST00000341423 KLF15Q9UIH9 416 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 DSEQ9UL01 958 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 PPP1R9AQ9ULJ8 1098 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 DNM1LO00429 736 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 MLYCDO95822 493 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 TRIM27P14373 513 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 FKBP1AP62942 108 aaKnown RBP9.08□□□□□ -0.96
HMGB1-203ENST00000341423 CACNB2Q08289 660 aaPredicted RBP9.08□□□□□ -0.96
HMGB1-203ENST00000341423 DGKHQ86XP1 1220 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 MSL3Q8N5Y2 521 aaKnown RBP9.08□□□□□ -0.96
HMGB1-203ENST00000341423 TMCO5AQ8N6Q1 288 aa9.08□□□□□ -0.96
HMGB1-203ENST00000341423 SUN3Q8TAQ9 357 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms