RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 ZBTB39O15060 712 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.35
VAPA-201ENST00000340541 MAFO75444 373 aaPredicted RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 LYPLA2O95372 231 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 NPEPPSP55786 919 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 EPC2Q52LR7 807 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 LARP1BQ659C4 914 aaKnown RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 RTN4RL1Q86UN2 441 aaPredicted RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 SNX21Q969T3 373 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 PPP1R16BQ96T49 567 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 C17orf80Q9BSJ5 609 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 ADAMTS10Q9H324 1103 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 PADI3Q9ULW8 664 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 NOC2LQ9Y3T9 749 aaKnown RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 TTC3P53804 2025 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 H3BQV1 296 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 ENPP3O14638 875 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 TMOD1P28289 359 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 TECP42680 631 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 TMEM266Q2M3C6 531 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 PUS10Q3MIT2 529 aaKnown RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 TPH2Q8IWU9 490 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 NEK9Q8TD19 979 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 OSMRQ99650 979 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 UBE2ZQ9H832 354 aaPredicted RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 ERVK-5Q9HDB9 667 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 AKT3Q9Y243 479 aa17.22■□□□□ 0.35
VAPA-201ENST00000340541 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
VAPA-201ENST00000340541 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.353e-19■■■□□ 15.2
VAPA-201ENST00000340541 GPC3P51654 580 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
VAPA-201ENST00000340541 PAK2Q13177 524 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 PTGDRQ13258 359 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 DHX33Q9H6R0 707 aaKnown RBP17.21■□□□□ 0.35
VAPA-201ENST00000340541 RWDD3Q9Y3V2 267 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
VAPA-201ENST00000340541 MED24O75448 989 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 RPS6KA5O75582 802 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 UPP2O95045 317 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 RB1P06400 928 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 IL17AQ16552 155 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 FAM228AQ86W67 206 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 CATSPER3Q86XQ3 398 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 CRIPAKQ8N1N5 446 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
VAPA-201ENST00000340541 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
VAPA-201ENST00000340541 C5orf67F2Z3F1 127 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 NCK2O43639 380 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 MGEA5O60502 916 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 RFC5P40937 340 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 GPM6BQ13491 265 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 XKR9Q5GH70 373 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 OTUD6AQ7L8S5 288 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
VAPA-201ENST00000340541 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 TUFT1Q9NNX1 390 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
VAPA-201ENST00000340541 ST3GAL5Q9UNP4 418 aa17.19■□□□□ 0.34
VAPA-201ENST00000340541 BRWD1Q9NSI6 2320 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 A0A087WWV3 80 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 LAD1O00515 517 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 DARSP14868 501 aaKnown RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 RARRES1P49788 294 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 ATP2C1P98194 919 aaPredicted RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 COL19A1Q14993 1142 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 FAM178BQ8IXR5 827 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 IGSF22Q8N9C0 903 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 SLC7A3Q8WY07 619 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
VAPA-201ENST00000340541 XPNPEP1Q9NQW7 623 aa17.18■□□□□ 0.34
VAPA-201ENST00000340541 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 GPR182O15218 404 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 GPR37L1O60883 481 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.348e-6■■□□□ 12.6
VAPA-201ENST00000340541 PDCP20941 246 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 SYT1P21579 422 aa17.17■□□□□ 0.34
VAPA-201ENST00000340541 RPA1P27694 616 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms