RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PDXKO00764 312 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 DSG3P32926 999 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 SLC7A5Q01650 507 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 MS4A14Q96JA4 679 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 JPH1Q9HDC5 661 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 CEP72Q9P209 647 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 EMSYQ7Z589 1322 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 EFCAB8A8MWE9 144 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PTK2Q05397 1052 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 GPC2Q8N158 579 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 OSTNP61366 133 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PRKCEQ02156 737 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 BIRC3Q13489 604 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 CCDC60Q8IWA6 550 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 DAW1Q8N136 415 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 BAP1Q92560 729 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 RIT2Q99578 217 aa11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 UBE2TQ9NPD8 197 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-202ENST00000340209 TLR2O60603 784 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 PON1P27169 355 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 SMTNP53814 917 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 PSMC5P62195 406 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 MAP1SQ66K74 1059 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CBWD2Q8IUF1 395 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CEP112Q8N8E3 955 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 TBC1D22BQ9NU19 505 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 DNAJC12Q9UKB3 198 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 PCDHA10Q9Y5I2 948 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 EIF3CLB5ME19 914 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 NOP56O00567 594 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 USP2O75604 605 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 NOL4O94818 638 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CYP2C8P10632 490 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 EIF3CQ99613 913 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 PI4K2AQ9BTU6 479 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 SLC9A2Q9UBY0 812 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ZNF214Q9UL59 606 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 PALMO75781 387 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 KRT5P13647 590 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 KAT5Q92993 513 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 VPS33BQ9H267 617 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 MYO1AQ9UBC5 1043 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 SALL4Q9UJQ4 1053 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 MYH10P35580 1976 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ERICH4A6NGS2 130 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 CSDE1O75534 798 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 KLRC1P26715 233 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 GYS2P54840 703 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ACTR2P61160 394 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ZBTB33Q86T24 672 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 METTL13Q8N6R0 699 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 NOX5Q96PH1 765 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 FAM213AQ9BRX8 229 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 ARFGAP3Q9NP61 516 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 LUC7LQ9NQ29 371 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
RBFOX1-202ENST00000340209 DHX15O43143 795 aaKnown RBP11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 CDR1P51861 262 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 LY6KQ17RY6 165 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 EPC2Q52LR7 807 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 CCDC170Q8IYT3 715 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 PNKPQ96T60 521 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 POLR3FQ9H1D9 316 aaPredicted RBP11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 BTBD7Q9P203 1132 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 SERPING1P05155 500 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
RBFOX1-202ENST00000340209 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms