RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 PFASO15067 1338 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PLS3P13797 630 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 RARRES1P49788 294 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NCKAP1LP55160 1127 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 MRPS9P82933 396 aaKnown RBP11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 KRT76Q01546 638 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 KCNA1Q09470 495 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 BFSP1Q12934 665 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NBPF9Q3BBW0 867 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 LMBR1Q8WVP7 490 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ARID2Q68CP9 1835 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 F8VZ95 297 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 H3BQF6 201 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PALMO75781 387 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 LMNB1P20700 586 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SOX5P35711 763 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 TAF3Q5VWG9 929 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CAPZA3Q96KX2 299 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ST7Q9NRC1 585 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 STIM2Q9P246 746 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NFIBO00712 420 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 HIP1RO75146 1068 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 STAM2O75886 525 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 KIF22Q14807 665 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PGM5Q15124 567 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SYCE1Q8N0S2 351 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 LMO3Q8TAP4 145 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ACCSQ96QU6 501 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 GPR88Q9GZN0 384 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PDE11AQ9HCR9 933 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 GDF3Q9NR23 364 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 TTC7AQ9ULT0 858 aaPredicted RBP11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 MYPNQ86TC9 1320 aa11.69□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ACTN1P12814 892 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 RTP1P59025 263 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 MTMR1Q13613 665 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DCAF17Q5H9S7 520 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CCDC181Q5TID7 509 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ZNF746Q6NUN9 644 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 HPCAL4Q9UM19 191 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CHMP2AO43633 222 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ZBED4O75132 1171 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 RPS6KA5O75582 802 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 VCAM1P19320 739 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 EPHB4P54760 987 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PSMC5P62195 406 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ZC2HC1CQ53FD0 456 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 RASGEF1CQ8N431 466 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 MREGQ8N565 214 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 REPS2Q8NFH8 660 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 UIMC1Q96RL1 719 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PDCD2LQ9BRP1 358 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 AS3MTQ9HBK9 375 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PXMP2Q9NR77 195 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ASTN2O75129 1339 aaPredicted RBP11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 NFASCO94856 1347 aa11.68□□□□□ -0.54
TRAF3IP2-201ENST00000340026 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CLIC2O15247 247 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 H2AFZP0C0S5 128 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 TMEM253P0C7T8 217 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 C2orf54Q08AI8 447 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CLUL1Q15846 466 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 POTEAQ6S8J7 498 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 H2AFVQ71UI9 128 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 FZD9O00144 591 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 DDX3XO00571 662 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 APBA1Q02410 837 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 HSP90B2PQ58FF3 399 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 TPCN2Q8NHX9 752 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 IL31RAQ8NI17 732 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SELENOOQ9BVL4 669 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
TRAF3IP2-201ENST00000340026 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms