RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ZCWPW1Q9H0M4 648 aa4.45□□□□□ -1.7
NEDD4-201ENST00000338963 ROPN1Q9HAT0 212 aaPredicted RBP4.45□□□□□ -1.7
NEDD4-201ENST00000338963 MBD2Q9UBB5 411 aa4.45□□□□□ -1.7
NEDD4-201ENST00000338963 CNOT7Q9UIV1 285 aaKnown RBP4.45□□□□□ -1.7
NEDD4-201ENST00000338963 NOC2LQ9Y3T9 749 aaKnown RBP4.45□□□□□ -1.7
NEDD4-201ENST00000338963 RGS16O15492 202 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 FKBP9O95302 570 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GJB6O95452 261 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 IFNA8P32881 189 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 AP2B1P63010 937 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 S100A12P80511 92 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CETN1Q12798 172 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NR1H3Q13133 447 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TWISTNBQ3B726 338 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ATAD3BQ5T9A4 648 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PSKH2Q96QS6 385 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TMEM109Q9BVC6 243 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CNNM2Q9H8M5 875 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GINM1Q9NU53 330 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SNX12Q9UMY4 172 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 STX8Q9UNK0 236 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 AK5Q9Y6K8 562 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 POTEB3A0JP26 581 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 E9PCH4 1651 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 FBP2O00757 339 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NPHP4O75161 1426 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PPP6R2O75170 966 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NDUFA10O95299 355 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 BMP15O95972 392 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 EGFRP00533 1210 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CDH3P22223 829 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 IARSP41252 1262 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ADKP55263 362 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 STRN3Q13033 797 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 UBE4AQ14139 1066 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 POTEBQ6S5H4 581 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SIX5Q8N196 739 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TSR2Q969E8 191 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ELAC2Q9BQ52 826 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CCSER2Q9H7U1 834 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 STMN3Q9NZ72 180 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PCDHA7Q9UN72 937 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ERVK-11Q9UQG0 969 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 B3GNT3Q9Y2A9 372 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 BIVM-ERCC5R4GMW8 1640 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ZFYVE9O95405 1425 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PNPLA6Q8IY17 1366 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 A0A088AWK7 358 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 A0A1B0GVG6 124 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 A0A1W2PQC6 194 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CLRN2A0PK11 232 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PHF20L1A8MW92 1017 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 RASA4BC9J798 803 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TRAFD1O14545 582 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 RASA4O43374 803 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ATP5BP06576 529 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CLK1P49759 484 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 LRRC63Q05C16 580 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 RAD9BQ6WBX8 426 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 DGLUCYQ7Z3D6 616 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 HDDC2Q7Z4H3 204 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SLC51BQ86UW2 128 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 BRSK2Q8IWQ3 736 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PDPRQ8NCN5 879 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 FAM163AQ96GL9 167 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 BTBD9Q96Q07 612 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SLITRK6Q9H5Y7 841 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NMRK1Q9NWW6 199 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ZMYND8Q9ULU4 1186 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ATP7BP35670 1465 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TRIM64A6NGJ6 449 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 TRIM64BA6NI03 449 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SOWAHDA6NJG2 315 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 H3BNX3 289 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CHL1O00533 1208 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SNX3O60493 162 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ESRRGP62508 458 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 E2F2Q14209 437 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 INSCQ1MX18 579 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ADGRG6Q86SQ4 1221 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ANKRD53Q8N9V6 530 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 LILRB1Q8NHL6 650 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GSDMBQ8TAX9 411 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NRBF2Q96F24 287 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CTRCQ99895 268 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 GPAMQ9HCL2 828 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 NOSIPQ9Y314 301 aaKnown RBP4.44□□□□□ -1.7
NEDD4-201ENST00000338963 MAGEB16A2A368 324 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 YKT6O15498 198 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SPAG7O75391 227 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 RPS6KB1P23443 525 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 RBL2Q08999 1139 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 DSTYKQ6XUX3 929 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 ARHGAP27Q6ZUM4 889 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 HAUS6Q7Z4H7 955 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 PM20D2Q8IYS1 436 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 VPS52Q8N1B4 723 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SH2D3CQ8N5H7 860 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 SPATA4Q8NEY3 305 aa4.44□□□□□ -1.7
NEDD4-201ENST00000338963 CIDECQ96AQ7 238 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms