RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 BZW2Q9Y6E2 419 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 MYH6P13533 1939 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 CCDC188H7C350 402 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 K7ENM7 598 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 DDX3XO00571 662 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 DIAPH2O60879 1101 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 IFNB1P01574 187 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 HARSP12081 509 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 HSPA9P38646 679 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 CCDC137Q6PK04 289 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 ARHGEF26Q96DR7 871 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 SGSM3Q96HU1 749 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 ACTR5Q9H9F9 607 aaPredicted RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 GEMIN8Q9NWZ8 242 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 NKIRAS1Q9NYS0 192 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 ZBTB5O15062 677 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 PAX7P23759 505 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 PCK1P35558 622 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
PCDH8-201ENST00000338862 SLIT3O75094 1523 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 PJA2O43164 708 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 TOM1O60784 492 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 GAS7O60861 476 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 KRT15P19012 456 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 PSMC2P35998 433 aaKnown RBP15.27■□□□□ 0.04
PCDH8-201ENST00000338862 SMTNP53814 917 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 PDIA5Q14554 519 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 ANKRD20A8PQ5CZ79 823 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 TMC3Q7Z5M5 1100 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 JAMLQ86YT9 394 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 SLC20A1Q8WUM9 679 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 MTMR9Q96QG7 549 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 MYH15Q9Y2K3 1946 aa15.27■□□□□ 0.04
PCDH8-201ENST00000338862 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 SEPT2Q15019 361 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 ARHGEF1Q92888 912 aaKnown RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 ZNF653Q96CK0 615 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 FAM84AQ96KN4 292 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 ALG6Q9Y672 507 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 F8VZ95 297 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 SPAG7O75391 227 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 KIAA1755Q5JYT7 1200 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 FAM196AQ6ZSG2 479 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 SPIRE2Q8WWL2 714 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 ATG4AQ8WYN0 398 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 BICD1Q96G01 975 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 DYDC2Q96IM9 177 aa15.27■□□□□ 0.03
PCDH8-201ENST00000338862 TTC7AQ9ULT0 858 aaPredicted RBP15.27■□□□□ 0.03
PCDH8-201ENST00000338862 TISP43B9A030 160 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 HNRNPH3P31942 346 aaKnown RBP15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ACCSLQ4AC99 568 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 TAOK1Q7L7X3 1001 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 FBXO11Q86XK2 927 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
PCDH8-201ENST00000338862 KRT35Q92764 455 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 HAUS1Q96CS2 278 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 PWWP2AQ96N64 755 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ERVK-5Q9HDB9 667 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 PCDHGC5Q9Y5F6 944 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 LMNB1P20700 586 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ZNF131P52739 623 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 CCDC6Q16204 474 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 CERKLQ49MI3 558 aaPredicted RBP15.26■□□□□ 0.03
PCDH8-201ENST00000338862 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 C9orf72Q96LT7 481 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 METTL14Q9HCE5 456 aaKnown RBP15.26■□□□□ 0.03
PCDH8-201ENST00000338862 FOXN3O00409 490 aaPredicted RBP15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ZNF543Q08ER8 600 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 TMED2Q15363 201 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ZNF365Q70YC5 407 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 PALB2Q86YC2 1186 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 HOMER3Q9NSC5 361 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 ABCF3Q9NUQ8 709 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 CTNNAL1Q9UBT7 734 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
PCDH8-201ENST00000338862 CCT8L1PA6NM43 557 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ENO4A6NNW6 628 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 FSBPO95073 299 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ICA1Q05084 483 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 KYNUQ16719 465 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 SGO2Q562F6 1265 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ERP44Q9BS26 406 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 ECT2Q9H8V3 914 aa15.25■□□□□ 0.03
PCDH8-201ENST00000338862 KLHL11Q9NVR0 708 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms