RNA–Protein interactions for RNA: ENST00000330554.4

TPM3P8-201, Transcript of tropomyosin 3 pseudogene 8, humanhuman

BASIC

Gene TPM3P8, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P8-201ENST00000330554 GPC3P51654 580 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 DRP2Q13474 957 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 PKP1Q13835 747 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 TFDP1Q14186 410 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 MXD4Q14582 209 aaPredicted RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 PTPAQ15257 358 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 FAM102BQ5T8I3 360 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 RASIP1Q5U651 963 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 MAEAQ7L5Y9 396 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 KRI1Q8N9T8 703 aaKnown RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 MCPH1Q8NEM0 835 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 PLIN2Q99541 437 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 FTHL17Q9BXU8 183 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 ADAMTS10Q9H324 1103 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 NOC2LQ9Y3T9 749 aaKnown RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 COL4A3BPQ9Y5P4 624 aa16.79■□□□□ 0.28
TPM3P8-201ENST00000330554 SPTLC2O15270 562 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 EYA4O95677 639 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 LAMTOR4Q0VGL1 99 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 ECM1Q16610 540 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 FAM43BQ6ZT52 329 aaPredicted RBP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 MYOCDQ8IZQ8 938 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 MMTAG2Q9BU76 263 aaKnown RBP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 OSBPL7Q9BZF2 842 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 AGO3Q9H9G7 860 aaKnown RBP16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 ST3GAL5Q9UNP4 418 aa16.78■□□□□ 0.28
TPM3P8-201ENST00000330554 A0A087WZ62 844 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 DENND3A2RUS2 1198 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 E9PMD0 336 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 YEATS4O95619 227 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 BRD1O95696 1058 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 DARSP14868 501 aaKnown RBP16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 ZSCAN20P17040 1043 aaPredicted RBP16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 CYP11B2P19099 503 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 NUCB2P80303 420 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 RAB30Q15771 203 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 FDXACB1Q9BRP7 624 aaPredicted RBP16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 FBXO2Q9UK22 296 aaPredicted RBP16.77■□□□□ 0.28
TPM3P8-201ENST00000330554 GRXCR1A8MXD5 290 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 ENPP3O14638 875 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 UPP2O95045 317 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 PHKA2P46019 1235 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 FAM117BQ6P1L5 589 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 KCNG4Q8TDN1 519 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 CLIC6Q96NY7 704 aa16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 POLR3FQ9H1D9 316 aaPredicted RBP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
TPM3P8-201ENST00000330554 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 TLL1O43897 1013 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 PPP6R2O75170 966 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 PLA2G4BP0C869 781 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 ME1P48163 572 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 DNM1Q05193 864 aaKnown RBP16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 GRIN1Q05586 938 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 GRB10Q13322 594 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 HYIQ5T013 277 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 TMEM40Q8WWA1 233 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 LRCH3Q96II8 777 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 XPNPEP1Q9NQW7 623 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 LRFN2Q9ULH4 789 aa16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 MORC2Q9Y6X9 1032 aaPredicted RBP16.75■□□□□ 0.27
TPM3P8-201ENST00000330554 SOX1O00570 391 aaPredicted RBP16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 ARL2P36404 184 aa16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 RABGGTBP53611 331 aa16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 KRT85P78386 507 aa16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 DEFB103AP81534 67 aa16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 DHX8Q14562 1220 aaKnown RBP16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
TPM3P8-201ENST00000330554 RRAGBQ5VZM2 374 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms