RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 NOVA2Q9UNW9 492 aaKnown RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TRIM33Q9UPN9 1127 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CLDN3O15551 220 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CREB3O43889 395 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 MTMR1Q13613 665 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TEKT4Q8WW24 435 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 C2orf40Q9H1Z8 148 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CHCHD3Q9NX63 227 aaKnown RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TMED8Q6PL24 325 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 KDM5DQ9BY66 1539 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SPARCL1Q14515 664 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 ACBD5Q5T8D3 534 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CCDC188H7C350 402 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CAV1Q03135 178 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TTC30BQ8N4P2 665 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 CFAP74Q9C0B2 1584 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 SNAP23O00161 211 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 NDUFA10O95299 355 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 PPP6R3Q5H9R7 873 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 E5RI56 91 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MYO1DO94832 1006 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MYCP01106 439 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 HLFQ16534 295 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 KLHL38Q2WGJ6 581 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TWF2Q6IBS0 349 aaKnown RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TRIM62Q9BVG3 475 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SAYSD1Q9NPB0 183 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 ADAM22Q9P0K1 906 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 APOBEC2Q9Y235 224 aaKnown RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 ATP7BP35670 1465 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SPAG7O75391 227 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 COPS2P61201 443 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 ST13P4Q8IZP2 240 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 CENPKQ9BS16 269 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SLC7A5P2Q9GIP4 190 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 COG4Q9H9E3 785 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 PIDD1Q9HB75 910 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 BSDC1Q9NW68 430 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 OCM2P0CE71 109 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 OCMP0CE72 109 aaPredicted RBP16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TMPRSS15P98073 1019 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 NR1H3Q13133 447 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 RAB42Q8N4Z0 105 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TRIML2Q8N7C3 387 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 SH3TC2Q8TF17 1288 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 TBC1D22BQ9NU19 505 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 STAP1Q9ULZ2 295 aa16.47■□□□□ 0.23
PTPN21-201ENST00000328736 MRPS25P82663 173 aaKnown RBP16.46■□□□□ 0.23
PTPN21-201ENST00000328736 EFHBQ8N7U6 833 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 PDCD6IPQ8WUM4 868 aaKnown RBP16.46■□□□□ 0.23
PTPN21-201ENST00000328736 SPATA17Q96L03 361 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 NR1H4Q96RI1 486 aaPredicted RBP16.46■□□□□ 0.23
PTPN21-201ENST00000328736 SPTLC3Q9NUV7 552 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 CYP2D6P10635 497 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 ZC3H12BQ5HYM0 836 aaKnown RBP16.46■□□□□ 0.23
PTPN21-201ENST00000328736 PIGBQ92521 554 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 UBE4BO95155 1302 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 PEX19P40855 299 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 AP1M1Q9BXS5 423 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 GTSE1Q9NYZ3 720 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 NR1D1P20393 614 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 TBXAS1P24557 533 aaPredicted RBP16.46■□□□□ 0.23
PTPN21-201ENST00000328736 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 VSTM4Q8IW00 320 aa16.46■□□□□ 0.23
PTPN21-201ENST00000328736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.22
PTPN21-201ENST00000328736 CASP1P29466 404 aa16.46■□□□□ 0.22
PTPN21-201ENST00000328736 ASPSCR1Q9BZE9 553 aa16.46■□□□□ 0.22
PTPN21-201ENST00000328736 TMEM60Q9H2L4 133 aa16.46■□□□□ 0.22
PTPN21-201ENST00000328736 KIF17Q9P2E2 1029 aa16.46■□□□□ 0.22
PTPN21-201ENST00000328736 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
PTPN21-201ENST00000328736 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
PTPN21-201ENST00000328736 PPP1R12AO14974 1030 aaPredicted RBP16.45■□□□□ 0.22
PTPN21-201ENST00000328736 CTIFO43310 598 aaKnown RBP16.45■□□□□ 0.22
PTPN21-201ENST00000328736 RPSAP08865 295 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms