RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 DDX3XO00571 662 aaKnown RBP eCLIP17.23■□□□□ 0.355e-9■■□□□ 11.8
SMARCD2-202ENST00000323347 FTCDO95954 541 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 RFX1P22670 979 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 SOX5P35711 763 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 PCNX4Q63HM2 1172 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 EIF1ADQ8N9N8 165 aaKnown RBP17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 PSMB7Q99436 277 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 ST6GALNAC4Q9H4F1 302 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 KCNH7Q9NS40 1196 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 SMARCAL1Q9NZC9 954 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 FRMD4BQ9Y2L6 1034 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 WNT10BO00744 389 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 HIP1RO75146 1068 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 KIF4AO95239 1232 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 H2AFZP0C0S5 128 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 COG2Q14746 738 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 H2AFVQ71UI9 128 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 IFT20Q8IY31 132 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 TPCN2Q8NHX9 752 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 ACTRT1Q8TDG2 376 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 LMBR1Q8WVP7 490 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
SMARCD2-202ENST00000323347 ERICH4A6NGS2 130 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 F8VZ95 297 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 MAPK13O15264 365 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 RNF40O75150 1001 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 SNRPFP62306 86 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 TNIP1Q15025 636 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 PADI6Q6TGC4 694 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 GSPT2Q8IYD1 628 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 VTI1AQ96AJ9 217 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 SH3GL2Q99962 352 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 GPR88Q9GZN0 384 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 TMEM206Q9H813 350 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 USP20Q9Y2K6 914 aa17.22■□□□□ 0.35
SMARCD2-202ENST00000323347 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 P4HA2O15460 535 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 EVI5O60447 810 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 DPEP1P16444 411 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 LMNB1P20700 586 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CXCL9Q07325 125 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 ALS2CLQ60I27 953 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 GJB7Q6PEY0 223 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 LMO3Q8TAP4 145 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 PMM2O15305 246 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 ACTN2P35609 894 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 GGCXP38435 758 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 MATR3P43243 847 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 SLC7A5Q01650 507 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 BFSP1Q12934 665 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 ENOX2Q16206 610 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 TAF4BQ92750 862 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 ZNF341Q9BYN7 854 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 TBC1D22BQ9NU19 505 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 LARSQ9P2J5 1176 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 SUCLA2Q9P2R7 463 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 APEX2Q9UBZ4 518 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
SMARCD2-202ENST00000323347 NCANO14594 1321 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 NFIBO00712 420 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 LMAN1P49257 510 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 MRPS9P82933 396 aaKnown RBP17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 ITGB3BPQ13352 177 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 KSR1Q8IVT5 923 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 SYCE1Q8N0S2 351 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 RASGEF1CQ8N431 466 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 MREGQ8N565 214 aa17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
SMARCD2-202ENST00000323347 SYTL5Q8TDW5 730 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms