RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 JAKMIP2Q96AA8 810 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 POLR3CQ9BUI4 534 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
TRIM55-202ENST00000315962 TEX13BQ9BXU2 312 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 MLXIPQ9HAP2 919 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 CAPN11Q9UMQ6 739 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 SYNPO2Q9UMS6 1093 aa8.33□□□□□ -1.08
TRIM55-202ENST00000315962 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 K7ENM7 598 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 CETN3O15182 167 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 PLA2G6O60733 806 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 NR3C1P04150 777 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 EPHX2P34913 555 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SF3A3Q12874 501 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 TRAF1Q13077 416 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 RAPGEF1Q13905 1077 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 MAN2A1Q16706 1144 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 NLRX1Q86UT6 975 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 UBIAD1Q9Y5Z9 338 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 POLR2AP24928 1970 aaKnown RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ZSCAN5CA6NGD5 496 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ZNF263O14978 683 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 P4HBP07237 508 aaKnown RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 MARK3P27448 753 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 QARSP47897 775 aaKnown RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 RARRES1P49788 294 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ATP1A2P50993 1020 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 DLG4P78352 724 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 IRX3P78415 501 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 EPHA7Q15375 998 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ANO5Q75V66 913 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 VSIG10LQ86VR7 867 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SH2D3CQ8N5H7 860 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 AFAP1L1Q8TED9 768 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 CCDC42Q96M95 316 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ARHGAP20Q9P2F6 1191 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ARMCX3Q9UH62 379 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-202ENST00000315962 HPCAL4Q9UM19 191 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SIK3Q9Y2K2 1263 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 SAR1BQ9Y6B6 198 aa8.32□□□□□ -1.08
TRIM55-202ENST00000315962 ZNF862O60290 1169 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 SETQ01105 290 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ZNF720Q7Z2F6 126 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 REPS2Q8NFH8 660 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 NSUN6Q8TEA1 469 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 OPTNQ96CV9 577 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CDCA5Q96FF9 252 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CEP170P1Q96L14 293 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CBWD1Q9BRT8 395 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 SELENOOQ9BVL4 669 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 TTYH3Q9C0H2 523 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ZNHIT6Q9NWK9 470 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CAPN6Q9Y6Q1 641 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ITIH6Q6UXX5 1313 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 FRMD3A2A2Y4 597 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 AKR1B10O60218 316 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 NOL4O94818 638 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 XRCC5P13010 732 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 EIF4A3P38919 411 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 LY6KQ17RY6 165 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 GJC2Q5T442 439 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 MCTP2Q6DN12 878 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 NFRKBQ6P4R8 1299 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 TRIM50Q86XT4 487 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CCDC60Q8IWA6 550 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 CCDC127Q96BQ5 260 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 SAAL1Q96ER3 474 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 RIT2Q99578 217 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 NAA15Q9BXJ9 866 aaKnown RBP8.31□□□□□ -1.08
TRIM55-202ENST00000315962 FAM107BQ9H098 131 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ACAD9Q9H845 621 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 TUFT1Q9NNX1 390 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ADAMTS1Q9UHI8 967 aa8.31□□□□□ -1.08
TRIM55-202ENST00000315962 ARFGEF1Q9Y6D6 1849 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 A0A1W2PQC6 194 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 C19orf81C9J6K1 198 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 BUB1O43683 1085 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 EXOC3O60645 756 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 MOCS3O95396 460 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 WHAMMP3Q1A5X7 153 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 MTERF2Q49AM1 385 aa8.3□□□□□ -1.08
TRIM55-202ENST00000315962 TTC31Q49AM3 519 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms