RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ATF7P17544 494 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 MCM7P33993 719 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 TXKP42681 527 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 CAMK1Q14012 370 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 SLC24A5Q71RS6 500 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 ZNF710Q8N1W2 664 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 FDXACB1Q9BRP7 624 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 ZSWIM4Q9H7M6 989 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 IFT122Q9HBG6 1241 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 C1orf112Q9NSG2 853 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 HCSTQ9UBK5 93 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 MYH9P35579 1960 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 ST18O60284 1047 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 BMPR1AP36894 532 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 FAM102BQ5T8I3 360 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 ZNF598Q86UK7 904 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 MICALL1Q8N3F8 863 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 CEP170P1Q96L14 293 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 ELAC1Q9H777 363 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 SUCLA2Q9P2R7 463 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
PPP1CA-201ENST00000312989 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 BTG3Q14201 252 aaPredicted RBP16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 ZNF174Q15697 407 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 TTC38Q5R3I4 469 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 ZNF410Q86VK4 478 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 TMEM143Q96AN5 459 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 MINDY3Q9H8M7 445 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 TMEM161AQ9NX61 479 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
PPP1CA-201ENST00000312989 LOXHD1Q8IVV2 1947 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 EVPLQ92817 2033 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 GRM6O15303 877 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 MED24O75448 989 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 FGFR1P11362 822 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 RFC5P40937 340 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 RARRES1P49788 294 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 TFF2Q03403 129 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 GPM6BQ13491 265 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 COL19A1Q14993 1142 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 EMC2Q15006 297 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 ODR4Q5SWX8 454 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 TPH2Q8IWU9 490 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 NLRP7Q8WX94 980 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 MRPL38Q96DV4 380 aaKnown RBP16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
PPP1CA-201ENST00000312989 MYO9BQ13459 2157 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 A0A087WWV3 80 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 DENND3A2RUS2 1198 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 DLL1O00548 723 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 MARCH6O60337 910 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 RB1P06400 928 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 STAG3L1P0CL83 205 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 DNAJB1P25685 340 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 CTNNB1P35222 781 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 IL17AQ16552 155 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 PAN2Q504Q3 1202 aaKnown RBP16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 LRRC55Q6ZSA7 311 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 RHPN2Q8IUC4 686 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 SLC7A3Q8WY07 619 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 TRAIPQ9BWF2 469 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 COL4A3BPQ9Y5P4 624 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 RALGAPA2Q2PPJ7 1873 aa16.31■□□□□ 0.2
PPP1CA-201ENST00000312989 TTC28Q96AY4 2481 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 GJB2P29033 226 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 POLGP54098 1239 aaPredicted RBP16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 CUL4AQ13619 759 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 ECM1Q16610 540 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 CLLU1OSQ5K130 101 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 ASAP3Q8TDY4 903 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 NLRP4Q96MN2 994 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 CASD1Q96PB1 797 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms