RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 RUBCNQ92622 972 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 DTNBP1Q96EV8 351 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
CLCN6-201ENST00000312413 TMEM247A6NEH6 219 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 E9PMD0 336 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CYP2C19P33261 490 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 AARSP49588 968 aaKnown RBP eCLIP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 ZNF211Q13398 564 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 MTERF2Q49AM1 385 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 RABGAP1LQ5R372 815 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 PI16Q6UXB8 463 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 EHD2Q9NZN4 543 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CCDC195A0A1B0GUA6 201 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 APOA1P02647 267 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 VSNL1P62760 191 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 FOXD4Q12950 439 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 TBC1D9BQ66K14 1250 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 KRT27Q7Z3Y8 459 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 XDHP47989 1333 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 IRX1P78414 480 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 TOB2Q14106 344 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CAPRIN1Q14444 709 aaKnown RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 KCTD2Q14681 263 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 GADL1Q6ZQY3 521 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 PRPF38AQ8NAV1 312 aaKnown RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 MSTO1Q9BUK6 570 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 PALMDQ9NP74 551 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 KLHL8Q9P2G9 620 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 TTC26A0AVF1 554 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 KCNH2Q12809 1159 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CATSPER1Q8NEC5 780 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CYP26B1Q9NR63 512 aa14.59□□□□□ -0.07
CLCN6-201ENST00000312413 CASP1P29466 404 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 HSPA9P38646 679 aaKnown RBP14.58□□□□□ -0.07
CLCN6-201ENST00000312413 OSTNP61366 133 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 CTTNQ14247 550 aaKnown RBP14.58□□□□□ -0.07
CLCN6-201ENST00000312413 SPATA21Q7Z572 469 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 CCNYL1Q8N7R7 359 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 NAF1Q96HR8 494 aaKnown RBP14.58□□□□□ -0.07
CLCN6-201ENST00000312413 EPN3Q9H201 632 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 ARL2BPQ9Y2Y0 163 aa14.58□□□□□ -0.07
CLCN6-201ENST00000312413 PNMA6FA0A0J9YX94 578 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 F8W8V4 182 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 KDM1AO60341 852 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 NR3C1P04150 777 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 SMARCA1P28370 1054 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 MDH1P40925 334 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 SYDE2Q5VT97 1194 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 RASSF3Q86WH2 238 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 ATP11CQ8NB49 1132 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 VIPAS39Q9H9C1 493 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 K7ERI5 159 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 PPP1R12AO14974 1030 aaPredicted RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 ATP1A1P05023 1023 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 NT5C2P49902 561 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF564Q8TBZ8 553 aaPredicted RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 SNF8Q96H20 258 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 DDX28Q9NUL7 540 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 LDHAP00338 332 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 PGM1P36871 562 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 SERPINB4P48594 390 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 RNF139Q8WU17 664 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 WWP1Q9H0M0 922 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 RPF1Q9H9Y2 349 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.08
CLCN6-201ENST00000312413 STRIP2Q9ULQ0 834 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 WDR17Q8IZU2 1322 aa14.58□□□□□ -0.08
CLCN6-201ENST00000312413 LOC102724159A0A0B4J2E5 919 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PLEKHA8P1O95397 391 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PDIA2Q13087 525 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 DHX34Q14147 1143 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PWP2Q15269 919 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PDXDC1Q6P996 788 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 CCDC137Q6PK04 289 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 GJB4Q9NTQ9 266 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 STK36Q9NRP7 1315 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 TEX33O43247 280 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 CALB1P05937 261 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PSAPP07602 524 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 CCND2P30279 289 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PTPN12Q05209 780 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 AP1B1Q10567 949 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ZC3H12BQ5HYM0 836 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 KIAA2013Q8IYS2 634 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ASNSD1Q9NWL6 643 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ATP8B3O60423 1300 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 YEATS2Q9ULM3 1422 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 MAST1Q9Y2H9 1570 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 STXBP3O00186 592 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ANP32DO95626 131 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 TRPC1P48995 793 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 BYSLQ13895 437 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms