RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 RSPH3Q86UC2 560 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 HERC6Q8IVU3 1022 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 EPSTI1Q96J88 318 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 GUCD1Q96NT3 240 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
SCFD1-201ENST00000311943 PFKMP08237 780 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 RPA1P27694 616 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
SCFD1-201ENST00000311943 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 GRB10Q13322 594 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 SEPT8Q92599 483 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 IFT122Q9HBG6 1241 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 ERVK-5Q9HDB9 667 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 MAGEB2O15479 319 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 ACTN1P12814 892 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 CDR2LQ86X02 465 aaPredicted RBP13.44□□□□□ -0.26
SCFD1-201ENST00000311943 SCLT1Q96NL6 688 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 KIFC3Q9BVG8 833 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 MYO9BQ13459 2157 aa13.44□□□□□ -0.26
SCFD1-201ENST00000311943 NPHP3-ACAD11A0A0J9YXS1 232 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 SFI1A8K8P3 1242 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 LYPLA2O95372 231 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 PDCP20941 246 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 SMAD3P84022 425 aaKnown RBP13.43□□□□□ -0.26
SCFD1-201ENST00000311943 KARSQ15046 597 aaKnown RBP13.43□□□□□ -0.26
SCFD1-201ENST00000311943 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
SCFD1-201ENST00000311943 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 POLR3CQ9BUI4 534 aaPredicted RBP13.43□□□□□ -0.26
SCFD1-201ENST00000311943 PANK2Q9BZ23 570 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 MTMR10Q9NXD2 777 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 FBXO2Q9UK22 296 aaPredicted RBP13.43□□□□□ -0.26
SCFD1-201ENST00000311943 A0A0C4DFX4 3053 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 COL4A6Q14031 1691 aa13.43□□□□□ -0.26
SCFD1-201ENST00000311943 ABHD14A-ACY1A0A1B0GW23 586 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 MEIS3P2A8K0S8 358 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 M0QZ92 97 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 CAND2O75155 1236 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 GJB5O95377 273 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 EDN1P05305 212 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 KCNJ6P48051 423 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 CRYBB1P53674 252 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-201ENST00000311943 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 PAK2Q13177 524 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 DHX8Q14562 1220 aaKnown RBP13.42□□□□□ -0.26
SCFD1-201ENST00000311943 NME8Q8N427 588 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 MYLIPQ8WY64 445 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 MAP7D2Q96T17 732 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 ADAM2Q99965 735 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 PRDM12Q9H4Q4 367 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 ZNF576Q9H609 170 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 TUFT1Q9NNX1 390 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 A0A087X0B3 334 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 TLL1O43897 1013 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 CSPG5O95196 566 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 F13A1P00488 732 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-201ENST00000311943 DARSP14868 501 aaKnown RBP13.42□□□□□ -0.26
SCFD1-201ENST00000311943 GLRA2P23416 452 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
SCFD1-201ENST00000311943 CAPSQ13938 189 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 MTRQ99707 1265 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 ZBED2Q9BTP6 218 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 COL4A3BPQ9Y5P4 624 aa13.42□□□□□ -0.26
SCFD1-201ENST00000311943 TRANK1O15050 2925 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 B4GALT5O43286 388 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 BAIAP3O94812 1187 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 FGFR1P11362 822 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 TMOD1P28289 359 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 PRPHP41219 470 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 TAP1Q03518 808 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 DNM1Q05193 864 aaKnown RBP13.41□□□□□ -0.26
SCFD1-201ENST00000311943 ORC2Q13416 577 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-201ENST00000311943 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 PDIA5Q14554 519 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 CRIPAKQ8N1N5 446 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 TOP1MTQ969P6 601 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-201ENST00000311943 ADGRA3Q8IWK6 1321 aa13.41□□□□□ -0.26
SCFD1-201ENST00000311943 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCFD1-201ENST00000311943 ARL2P36404 184 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms