RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 KCNJ2P63252 427 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 CUL1Q13616 776 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 SLC18A3Q16572 532 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 FAM26FQ5R3K3 315 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 GPC2Q8N158 579 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 SMC1BQ8NDV3 1235 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 GLIS3Q8NEA6 775 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 SCFD2Q8WU76 684 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 CELF4Q9BZC1 486 aaKnown RBP20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 ADAMTS1Q9UHI8 967 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 GAKO14976 1311 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 USP17L5A8MUK1 530 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 DIAPH2O60879 1101 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 CLK2P49760 499 aaKnown RBP20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 DHX9Q08211 1270 aaKnown RBP20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 ZNF317Q96PQ6 595 aaPredicted RBP20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 DPH5Q9H2P9 285 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 ATAD5Q96QE3 1844 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 CHN1P15882 459 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 TMC3Q7Z5M5 1100 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 PARD3BQ8TEW8 1205 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 SPAG5Q96R06 1193 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 FAM129AQ9BZQ8 928 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 TRIM31Q9BZY9 425 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 MYH7BA7E2Y1 1941 aa20.48■□□□□ 0.87
HERPUD2-201ENST00000311350 A8MUI8 341 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 SHBGP04278 402 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 RHBDL3P58872 404 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 LRRC41Q15345 812 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 RPS6KA1Q15418 735 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 ARMC9Q7Z3E5 817 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 KCNK18Q7Z418 384 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 CCDC65Q8IXS2 484 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 LRRC34Q8IZ02 419 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 TAF4BQ92750 862 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 P3H4Q92791 437 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 ELAC2Q9BQ52 826 aaKnown RBP20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 LSM14BQ9BX40 385 aaKnown RBP20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 ABCF3Q9NUQ8 709 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 POTEMA6NI47 508 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 F8VZ95 297 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 IL1R1P14778 569 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 ANXA13P27216 316 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 GPSM2P81274 684 aa20.47■□□□□ 0.87
HERPUD2-201ENST00000311350 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 PNMA6FA0A0J9YX94 578 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 TRAF5O00463 557 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 TTI1O43156 1089 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 POLR2FP61218 127 aaKnown RBP20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 TAX1BP1Q86VP1 789 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 MICAL1Q8TDZ2 1067 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 ZBTB10Q96DT7 871 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 SELENOSQ9BQE4 189 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 NUDT12Q9BQG2 462 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 SWAP70Q9UH65 585 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 ATP8A1Q9Y2Q0 1164 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 MMEP08473 750 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 EDRF1Q3B7T1 1238 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 UBA5Q9GZZ9 404 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
HERPUD2-201ENST00000311350 MYO3BQ8WXR4 1341 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 SMIM23A6NLE4 172 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 KIF4AO95239 1232 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 CAPRIN2Q6IMN6 1127 aaKnown RBP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 CRELD2Q6UXH1 353 aaPredicted RBP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 TLCD1Q96CP7 247 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 GLT8D2Q9H1C3 349 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 KCNMB3Q9NPA1 279 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 DDX25Q9UHL0 483 aaKnown RBP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 BHMG1C9JSJ3 638 aaPredicted RBP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 C6orf229H3BNL8 230 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 CALRP27797 417 aaKnown RBP20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 MIS18BP1Q6P0N0 1132 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 HAS1Q92839 578 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 GANQ9H2C0 597 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 CD209Q9NNX6 404 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 POLLQ9UGP5 575 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
HERPUD2-201ENST00000311350 SMNDC1O75940 238 aaKnown RBP eCLIP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 ATP2B4P23634 1241 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 RAPGEF1Q13905 1077 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 IFI16Q16666 785 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 PIGWQ7Z7B1 504 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 COA7Q96BR5 231 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 BATF3Q9NR55 127 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 NOC2LQ9Y3T9 749 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 BZW2Q9Y6E2 419 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 PITPNM2Q9BZ72 1349 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 ALDH5A1P51649 535 aaPredicted RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 ASIC2Q16515 512 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms