RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PPP1R2P41236 205 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 WDR44Q5JSH3 913 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 COA7Q96BR5 231 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 IL1RAPL1Q9NZN1 696 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 EPN1Q9Y6I3 576 aaPredicted RBP16.37■□□□□ 0.21
LEMD3-201ENST00000308330 TRIM43BA6NCK2 446 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 EXOC3O60645 756 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 GCNT3O95395 438 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 RFC5P40937 340 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 MAGEA1P43355 309 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 NELFCDQ8IXH7 590 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 IQCF2Q8IXL9 164 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 MRPL44Q9H9J2 332 aaKnown RBP16.37■□□□□ 0.21
LEMD3-201ENST00000308330 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 NRKQ7Z2Y5 1582 aa16.37■□□□□ 0.21
LEMD3-201ENST00000308330 HNRNPRO43390 633 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 VHLP40337 213 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 APOBEC3FQ8IUX4 373 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 REXO1L1PQ8IX06 675 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 MICALL2Q8IY33 904 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 SUN5Q8TC36 379 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 SKA1Q96BD8 255 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 ZC3H13Q5T200 1668 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 CUL4AQ13619 759 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 MYCBPAPQ8TBZ2 947 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 NMD3Q96D46 503 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 DDX25Q9UHL0 483 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 DSEQ9UL01 958 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 PREX1Q8TCU6 1659 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 GOLGA8CPA6NN73 597 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 TUBA4AP68366 448 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 IL9RQ01113 521 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
LEMD3-201ENST00000308330 CSGALNACT2Q8N6G5 542 aa16.36■□□□□ 0.21
LEMD3-201ENST00000308330 NTSR2O95665 410 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 CLCN2P51788 898 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 TRPC1P48995 793 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 PMS2P54278 862 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 TRIM16LQ309B1 348 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 ANKRD20A4Q4UJ75 823 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 ANKRD20A2Q5SQ80 823 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 ANKRD20A1Q5TYW2 823 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 STKLD1Q8NE28 680 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 MYO3AQ8NEV4 1616 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
LEMD3-201ENST00000308330 OR52Z1P0C646 297 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 SLC7A5Q01650 507 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 GRIK3Q13003 919 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 DCTN2Q13561 401 aaKnown RBP16.35■□□□□ 0.21
LEMD3-201ENST00000308330 FAM47EQ6ZV65 393 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 GALNT15Q8N3T1 639 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 RIOK1Q9BRS2 568 aaKnown RBP16.35■□□□□ 0.21
LEMD3-201ENST00000308330 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
LEMD3-201ENST00000308330 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 BCORL1Q5H9F3 1711 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 KRT76Q01546 638 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
LEMD3-201ENST00000308330 MIS18BP1Q6P0N0 1132 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 ZNF229Q9UJW7 825 aa16.35■□□□□ 0.21
LEMD3-201ENST00000308330 PEX14O75381 377 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 DCTN3O75935 186 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 SCARF1Q14162 830 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 TRPM8Q7Z2W7 1104 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 RPAP3Q9H6T3 665 aaPredicted RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 GIPC1O14908 333 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 GYS1P13807 737 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 PMS1P54277 932 aaKnown RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 STRIP1Q5VSL9 837 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 NFU1Q9UMS0 254 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 LMNB1P20700 586 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 CRELD2Q6UXH1 353 aaPredicted RBP16.34■□□□□ 0.21
LEMD3-201ENST00000308330 SLFN12Q8IYM2 578 aa16.34■□□□□ 0.21
LEMD3-201ENST00000308330 RDH13Q8NBN7 331 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms