RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF653Q96CK0 615 aa15.21■□□□□ 0.02
SDC2-201ENST00000302190 TLR10Q9BXR5 811 aa15.21■□□□□ 0.02
SDC2-201ENST00000302190 CICQ96RK0 1608 aaPredicted RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 GALCP54803 685 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.02
SDC2-201ENST00000302190 FAM118BQ9BPY3 351 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 NSRP1Q9H0G5 558 aaKnown RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 SERPINA10Q9UK55 444 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 PHF20L1A8MW92 1017 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 ZBTB39O15060 712 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 NEBLO76041 1014 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 EIF2AK2P19525 551 aaKnown RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 CRKP46108 304 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 KCNA1Q09470 495 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 MTM1Q13496 603 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 HIBCHQ6NVY1 386 aaPredicted RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 ANKS1AQ92625 1134 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 ELAC2Q9BQ52 826 aaKnown RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 KCNJ1P48048 391 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 BIRC2Q13490 618 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 RNF10Q8N5U6 811 aaKnown RBP15.2■□□□□ 0.02
SDC2-201ENST00000302190 WHAMMQ8TF30 809 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 CASKIN2Q8WXE0 1202 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 FGFBP2Q9BYJ0 223 aa15.2■□□□□ 0.02
SDC2-201ENST00000302190 MYH13Q9UKX3 1938 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.022e-10■■■□□ 16.5
SDC2-201ENST00000302190 ITGA4P13612 1032 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 EGFL6Q8IUX8 553 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 OSGEPQ9NPF4 335 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 PI4KBQ9UBF8 816 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 BZW2Q9Y6E2 419 aaKnown RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 SYF2O95926 243 aaKnown RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 KRT15P19012 456 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 SWT1Q5T5J6 900 aaKnown RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 NKIRAS1Q9NYS0 192 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 EVI5O60447 810 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 LSP1P33241 339 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 PEX3P56589 373 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 SARNPP82979 210 aaKnown RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 AMPD2Q01433 879 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 C2CD6Q53TS8 623 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 MIIPQ5JXC2 388 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 KLHDC7AQ5VTJ3 777 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 ATP6V1G3Q96LB4 118 aa15.19■□□□□ 0.02
SDC2-201ENST00000302190 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
SDC2-201ENST00000302190 LAMA4Q16363 1823 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 CYP11B2P19099 503 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 ILDR2Q71H61 639 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 NLRP14Q86W24 1093 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 SAAL1Q96ER3 474 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 CCT8L2Q96SF2 557 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 RTFDC1Q9BY42 306 aaPredicted RBP15.18■□□□□ 0.02
SDC2-201ENST00000302190 VIPAS39Q9H9C1 493 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 FGFR4P22455 802 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 ALDH1B1P30837 517 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 SMTNP53814 917 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 ZBTB16Q05516 673 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 PDIA5Q14554 519 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 POMGNT1Q8WZA1 660 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 LBHD1Q9BQE6 289 aaPredicted RBP15.18■□□□□ 0.02
SDC2-201ENST00000302190 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 SALL4Q9UJQ4 1053 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
SDC2-201ENST00000302190 LMNB1P20700 586 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 STAT2P52630 851 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SDC2-201ENST00000302190 TBC1D1Q86TI0 1168 aaPredicted RBP15.18■□□□□ 0.02
SDC2-201ENST00000302190 METTL13Q8N6R0 699 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 C4orf32Q8N8J7 132 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 SCFD1Q8WVM8 642 aa15.18■□□□□ 0.02
SDC2-201ENST00000302190 THAP12O43422 761 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 STX2P32856 288 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 CASP5P51878 434 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 PASD1Q8IV76 773 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 SLC30A5Q8TAD4 765 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 PBKQ96KB5 322 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
SDC2-201ENST00000302190 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 ABCB11O95342 1321 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms