RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 IL31Q6EBC2 164 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 MLXIPLQ9NP71 852 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 PPIEQ9UNP9 301 aaKnown RBP10.62□□□□□ -0.71
TRIM44-201ENST00000299413 HMGCS2P54868 508 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 TMED1Q13445 227 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 ZNF512Q96ME7 567 aaPredicted RBP10.62□□□□□ -0.71
TRIM44-201ENST00000299413 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 RNF146Q9NTX7 359 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 CHMP1BQ7LBR1 199 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 TADA2BQ86TJ2 420 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 FGFR1OP2Q9NVK5 253 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 RGL1Q9NZL6 768 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 ADGRA2Q96PE1 1338 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 C10orf53Q8N6V4 93 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 TCP11Q8WWU5 503 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 RALAP11233 206 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 ZNF235Q14590 738 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 LRRC31Q6UY01 552 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 STRIP2Q9ULQ0 834 aa10.62□□□□□ -0.71
TRIM44-201ENST00000299413 ETFBP38117 255 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 RPAP3Q9H6T3 665 aaPredicted RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 HSPA4LO95757 839 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SLFNL1Q499Z3 407 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 KRT80Q6KB66 452 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 RAB42Q8N4Z0 105 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 EPB41L5Q9HCM4 733 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SCUBE2Q9NQ36 999 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 IFT88Q13099 833 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 OGFRQ9NZT2 677 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 UBE4BO95155 1302 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 CLDN3O15551 220 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 DIAPH2O60879 1101 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 BTBD8Q5XKL5 378 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SDE2Q6IQ49 451 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 EIF3CLB5ME19 914 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 HIP1RO75146 1068 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SPAG7O75391 227 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 EIF3CQ99613 913 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 ZNF589Q86UQ0 364 aaPredicted RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 EFHBQ8N7U6 833 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 MTIF3Q9H2K0 278 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 PCCAP05165 728 aaPredicted RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 IGFBP4P22692 258 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 PCDHA7Q9UN72 937 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 ST8SIA6P61647 398 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 TWF1Q12792 350 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 TAF11Q15544 211 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 HOMER3Q9NSC5 361 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 RINLQ6ZS11 566 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 CROCCP2Q86T23 111 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 APOBEC3FQ8IUX4 373 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 VPS11Q9H270 941 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 PPP2R2CQ9Y2T4 447 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 TTI1O43156 1089 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 RARBP10826 455 aa10.61□□□□□ -0.71
TRIM44-201ENST00000299413 TDRD7Q8NHU6 1098 aaKnown RBP10.61□□□□□ -0.71
TRIM44-201ENST00000299413 ALDH1A1P00352 501 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 TTC17Q96AE7 1141 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 SLC13A1Q9BZW2 595 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 MAPK6Q16659 721 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 GRAMD1BQ3KR37 738 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 FASTKD1Q53R41 847 aaKnown RBP10.6□□□□□ -0.71
TRIM44-201ENST00000299413 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
TRIM44-201ENST00000299413 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 BBOX1O75936 387 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 KCNA2P16389 499 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 IFNA8P32881 189 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 BBOF1Q8ND07 529 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 ZFYVE16Q7Z3T8 1539 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 PDE8BO95263 885 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 PLEKHA8P1O95397 391 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 RFX8Q6ZV50 586 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 CCDC17Q96LX7 622 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 SPON1Q9HCB6 807 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 AIPL1Q9NZN9 384 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 POTEMA6NI47 508 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 GALNT17Q6IS24 598 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 TRPV6Q9H1D0 765 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 GABBR1Q9UBS5 961 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 DDX5P17844 614 aaKnown RBP10.6□□□□□ -0.71
TRIM44-201ENST00000299413 CASP14P31944 242 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 PAPOLAP51003 745 aaKnown RBP10.6□□□□□ -0.71
TRIM44-201ENST00000299413 LMNB2Q03252 620 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 CUL1Q13616 776 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
TRIM44-201ENST00000299413 SH2D3AQ9BRG2 576 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms