RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 ZSCAN5BA6NJL1 495 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 H7C1W4 665 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 ASLP04424 464 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 RESTQ13127 1097 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 NMRK1Q9NWW6 199 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 PPARGC1AQ9UBK2 798 aaKnown RBP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 FAM135BQ49AJ0 1406 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 TTI1O43156 1089 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 GAS7O60861 476 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 IDO1P14902 403 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 JAK1P23458 1154 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 RAB15P59190 212 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 GOLM1Q8NBJ4 401 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 CNBD2Q96M20 576 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 AMFRQ9UKV5 643 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 P4HA1P13674 534 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 FUT4P22083 530 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 SCRN3Q0VDG4 424 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 METTL24Q5JXM2 366 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 ADSSL1Q8N142 457 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 RNF38Q9H0F5 515 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 STRN4Q9NRL3 753 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.4
SNIP1-201ENST00000296215 ACTN1P12814 892 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 TMED2Q15363 201 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 LETM2Q2VYF4 491 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 UBL4BQ8N7F7 174 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 GPATCH1Q9BRR8 931 aaKnown RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 AK5Q9Y6K8 562 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 SERPINB10P48595 397 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 KLHL30Q0D2K2 578 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 RAPGEF4Q8WZA2 1011 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 CCDC124Q96CT7 223 aaKnown RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 ADAM22Q9P0K1 906 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 HSD17B3P37058 310 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 ARHGEF6Q15052 776 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 SRRM1Q8IYB3 904 aaKnown RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 AENQ8WTP8 325 aaKnown RBP12.52□□□□□ -0.41
SNIP1-201ENST00000296215 ZNF212Q9UDV6 495 aa12.52□□□□□ -0.41
SNIP1-201ENST00000296215 WFS1O76024 890 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 S100A9P06702 114 aaKnown RBP12.51□□□□□ -0.41
SNIP1-201ENST00000296215 ARFIP2P53365 341 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
SNIP1-201ENST00000296215 TMEM62Q0P6H9 643 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 LRP8Q14114 963 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 VWA3BQ502W6 1294 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 USP37Q86T82 979 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 KCTD4Q8WVF5 259 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 DACH2Q96NX9 599 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CCDC188H7C350 402 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 LYNP07948 512 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 ACADVLP49748 655 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CDK7P50613 346 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 HIC1Q14526 733 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 EGFLAMQ63HQ2 1017 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 FMR1NBQ8N0W7 255 aaPredicted RBP12.51□□□□□ -0.41
SNIP1-201ENST00000296215 PBKQ96KB5 322 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 WDR62O43379 1518 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 POC1B-GALNT4F8VUJ3 575 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CIITAP33076 1130 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 ADCK5Q3MIX3 580 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CCT6BQ92526 530 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 MAML1Q92585 1016 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 BORCS5Q969J3 196 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 SNX27Q96L92 541 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 ZMAT5Q9UDW3 170 aaKnown RBP12.51□□□□□ -0.41
SNIP1-201ENST00000296215 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
SNIP1-201ENST00000296215 CCRL2O00421 344 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 OXSR1O95747 527 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 OASLQ15646 514 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms