RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TTC13Q8NBP0 860 aa18.76■□□□□ 0.59
PCDHA13-201ENST00000289272 ICA1LQ8NDH6 482 aa18.76■□□□□ 0.59
PCDHA13-201ENST00000289272 PLA2G12BQ9BX93 195 aa18.76■□□□□ 0.59
PCDHA13-201ENST00000289272 SNAP23O00161 211 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 ZBTB22O15209 634 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 LIG4P49917 911 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 DALRD3Q5D0E6 543 aaKnown RBP18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 TC2NQ8N9U0 490 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 OXER1Q8TDS5 423 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 ACCSQ96QU6 501 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 FBXL5Q9UKA1 691 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 TTC36A6NLP5 189 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 CPP00450 1065 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 PDHA1P08559 390 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 CDK8P49336 464 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 FAM102BQ5T8I3 360 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 RSBN1LQ6PCB5 846 aaPredicted RBP18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 TTLL6Q8N841 843 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 IL25Q9H293 177 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 TNNC2P02585 160 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 ARL4CP56559 192 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 CUL4BQ13620 913 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 CEP70Q8NHQ1 597 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 NSMCE1Q8WV22 266 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 RBM41Q96IZ5 413 aaKnown RBP18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 MMS19Q96T76 1030 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 WNT8AQ9H1J5 351 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 ATP6V0A4Q9HBG4 840 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 CEMIPQ8WUJ3 1361 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 DNAL1Q4LDG9 190 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 TRPM8Q7Z2W7 1104 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 BAG5Q9UL15 447 aa18.75■□□□□ 0.59
PCDHA13-201ENST00000289272 GHRP10912 638 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 BMP3P12645 472 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 BRAFP15056 766 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PRLRP16471 622 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 DMP1Q13316 513 aaPredicted RBP18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 ART3Q13508 389 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 ODR4Q5SWX8 454 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 SHC4Q6S5L8 630 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 EPC1Q9H2F5 836 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 ADAMTS1Q9UHI8 967 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 GDAQ9Y2T3 454 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 UTYO14607 1347 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 SLC26A4O43511 780 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 C1orf146Q5VVC0 180 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 RNF207Q6ZRF8 634 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 STAG2Q8N3U4 1231 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 CCDC138Q96M89 665 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 CPDO75976 1380 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 ARFIP2P53365 341 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PTPROQ16827 1216 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PYROXD1Q8WU10 500 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PPWD1Q96BP3 646 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 THOC1Q96FV9 657 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 APOBEC2Q9Y235 224 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 GINS2Q9Y248 185 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 LPXNO60711 386 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 COL15A1P39059 1388 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PCYT1AP49585 367 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 GSPT2Q8IYD1 628 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 FAM167BQ9BTA0 163 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 AGLP35573 1532 aa18.74■□□□□ 0.59
PCDHA13-201ENST00000289272 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 CYB5D1Q6P9G0 228 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 FUCA2Q9BTY2 467 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 TRIM33Q9UPN9 1127 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 SLC16A2P36021 539 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 REXO1L1PQ8IX06 675 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 GUF1Q8N442 669 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 LRRC1Q9BTT6 524 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 PFDN6O15212 129 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 DIAPH2O60879 1101 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 TRPA1O75762 1119 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 TJP3O95049 919 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 TRIM56Q9BRZ2 755 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 L1RE1Q9UN81 338 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 SNX24Q9Y343 169 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 ZNF189O75820 626 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 RIBC1Q8N443 379 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 KDM4CQ9H3R0 1056 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 IPO11Q9UI26 975 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 KRT38O76015 456 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 NCAPG2Q86XI2 1143 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 SCYL1Q96KG9 808 aa18.73■□□□□ 0.59
PCDHA13-201ENST00000289272 TEX33O43247 280 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms