RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZKSCAN8Q15776 578 aaPredicted RBP11.27□□□□□ -0.61
SKA1-201ENST00000285116 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.61
SKA1-201ENST00000285116 ODF2Q5BJF6 829 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 RAPGEF5Q92565 580 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 SYT11Q9BT88 431 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 MKNK1Q9BUB5 465 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 POLR3CQ9BUI4 534 aaPredicted RBP11.27□□□□□ -0.61
SKA1-201ENST00000285116 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 FAM114A2Q9NRY5 505 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 KCNK3O14649 394 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 ATP6V1G2O95670 118 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 GAP43P17677 238 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 ELF3P78545 371 aaPredicted RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 POU5F1Q01860 360 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 TRADDQ15628 312 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 PRR5LQ6MZQ0 368 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 ALKBH5Q6P6C2 394 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 RPGRQ92834 1020 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.26□□□□□ -0.61
SKA1-201ENST00000285116 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 TMOD1P28289 359 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 CRELD2Q6UXH1 353 aaPredicted RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 NT5DC3Q86UY8 548 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 CCDC26Q8TAB7 109 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 TMEM174Q8WUU8 243 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 CENPTQ96BT3 561 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
SKA1-201ENST00000285116 ASTN1O14525 1302 aa11.26□□□□□ -0.61
SKA1-201ENST00000285116 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 H2AFZP0C0S5 128 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SPATA31C1P0DKV0 1188 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 MUTP22033 750 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 EIF3BP55884 814 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 H2AFVQ71UI9 128 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SLC35C1Q96A29 364 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 LENG9Q96B70 501 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SPAG5Q96R06 1193 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 OPLAHO14841 1288 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 MARCH6O60337 910 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 GSTA1P08263 222 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CYP3A4P08684 503 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 TMEM253P0C7T8 217 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 RFX1P22670 979 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SREBF1P36956 1147 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CATSPER3Q86XQ3 398 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 KLHL7Q8IXQ5 586 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CCHCR1Q8TD31 782 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.25□□□□□ -0.61
SKA1-201ENST00000285116 BCCIPQ9P287 314 aaKnown RBP eCLIP11.25□□□□□ -0.61
SKA1-201ENST00000285116 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 FRMPD4Q14CM0 1322 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 MEIS2O14770 477 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 PPFIA2O75334 1257 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 SLC9A1P19634 815 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 LMNB1P20700 586 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 DRD4P21917 467 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CASP5P51878 434 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 DRG2P55039 364 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 RIPK1Q13546 671 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 C11orf91Q3C1V1 193 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 HHIPL2Q6UWX4 724 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 OR2W6PQ8NHA6 318 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 REEP2Q9BRK0 252 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
SKA1-201ENST00000285116 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
SKA1-201ENST00000285116 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 BUB1BO60566 1050 aaPredicted RBP11.24□□□□□ -0.61
SKA1-201ENST00000285116 ATP2C2O75185 946 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 NR3C1P04150 777 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 DNA2P51530 1060 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 PPATQ06203 517 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
SKA1-201ENST00000285116 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms