RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SMIM22K7EJ46 135 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 KIAA0355O15063 1070 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 CYP26A1O43174 497 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 DUSP11O75319 330 aaKnown RBP11.45□□□□□ -0.58
LRTM1-201ENST00000273286 BRD1O95696 1058 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 PGK1P00558 417 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 APPP05067 770 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 RAG1P15918 1043 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
LRTM1-201ENST00000273286 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 GLT1D1Q96MS3 346 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 GUCD1Q96NT3 240 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 GSX1Q9H4S2 264 aaPredicted RBP11.45□□□□□ -0.58
LRTM1-201ENST00000273286 SLC38A10Q9HBR0 1119 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 GPN3Q9UHW5 284 aaPredicted RBP11.45□□□□□ -0.58
LRTM1-201ENST00000273286 ELP1O95163 1332 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
LRTM1-201ENST00000273286 CHGBP05060 677 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 TSPY3P0CV98 308 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 TSPY8P0CW00 308 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 LIG1P18858 919 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 ACLYP53396 1101 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 FPGSQ05932 587 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 FAM160B2Q86V87 743 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
LRTM1-201ENST00000273286 IFNL3Q8IZI9 196 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 ANKRD35Q8N283 1001 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 CHURC1Q8WUH1 139 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
LRTM1-201ENST00000273286 CCDC86Q9H6F5 360 aaKnown RBP11.44□□□□□ -0.58
LRTM1-201ENST00000273286 TMEM39AQ9NV64 488 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
LRTM1-201ENST00000273286 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
LRTM1-201ENST00000273286 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 MAPK1P28482 360 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 STAT2P52630 851 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 KLHDC9Q8NEP7 349 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 RNPC3Q96LT9 517 aaKnown RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 NUP88Q99567 741 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 SEZ6LQ9BYH1 1024 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 NAPBQ9H115 298 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 EPB41L4AQ9HCS5 686 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 ZHX1Q9UKY1 873 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 PLA2G6O60733 806 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 PQBP1O60828 265 aaKnown RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 TKFCQ3LXA3 575 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 C9orf50Q5SZB4 431 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 CCSAPQ6IQ19 270 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 TICAM2Q86XR7 235 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 WDR89Q96FK6 387 aaPredicted RBP11.43□□□□□ -0.58
LRTM1-201ENST00000273286 BCO2Q9BYV7 579 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 ACAD9Q9H845 621 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
LRTM1-201ENST00000273286 UNC80Q8N2C7 3258 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 ASB14A6NK59 587 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 TLR3O15455 904 aaKnown RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 DYNC1LI2O43237 492 aaPredicted RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 C6orf222P0C671 652 aaPredicted RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 SLC1A4P43007 532 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 GJA9P57773 515 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 NKX3-2P78367 333 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 KCNA10Q16322 511 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 SLFN13Q68D06 897 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 ZNF765Q7L2R6 523 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 FAM161BQ96MY7 647 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 CDX2Q99626 313 aaPredicted RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
LRTM1-201ENST00000273286 UPF3AQ9H1J1 476 aaKnown RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 RAVER2Q9HCJ3 691 aaKnown RBP11.42□□□□□ -0.58
LRTM1-201ENST00000273286 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
LRTM1-201ENST00000273286 PRDM1O75626 825 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 CABYRO75952 493 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 TIMP1P01033 207 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
LRTM1-201ENST00000273286 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 PPARAQ07869 468 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
LRTM1-201ENST00000273286 PPIGQ13427 754 aaKnown RBP eCLIP11.41□□□□□ -0.58
LRTM1-201ENST00000273286 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 ARMCX2Q7L311 632 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 STK11IPQ8N1F8 1099 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 LRRC4CQ9HCJ2 640 aa11.41□□□□□ -0.58
LRTM1-201ENST00000273286 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms