RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SDE2Q6IQ49 451 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 RPRD1BQ9NQG5 326 aaKnown RBP14.11□□□□□ -0.15
PRDM16-201ENST00000270722 KIAA1468Q9P260 1216 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 CALB1P05937 261 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 CENPUQ71F23 418 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 RTL3Q8N8U3 475 aaKnown RBP14.11□□□□□ -0.15
PRDM16-201ENST00000270722 MAGOHBQ96A72 148 aaKnown RBP14.11□□□□□ -0.15
PRDM16-201ENST00000270722 MT-ND3P03897 115 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 KRT16P08779 473 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 ZNF667Q5HYK9 610 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 TTLL6Q8N841 843 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 BEST2Q8NFU1 509 aa14.11□□□□□ -0.15
PRDM16-201ENST00000270722 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 ZBBXA8MT70 800 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 MXI1P50539 228 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 TTLL4Q14679 1199 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 SZRD1Q7Z422 152 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 NAF1Q96HR8 494 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 CALN1Q9BXU9 219 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 RGL1Q9NZL6 768 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 IFNL3Q8IZI9 196 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 PI4K2BQ8TCG2 481 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 GJA10Q969M2 543 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 FOXP1Q9H334 677 aaPredicted RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 INSRP06213 1382 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 PGRMC1O00264 195 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 COBLO75128 1261 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 AP1S2P56377 157 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 E5RI56 91 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 HSPA2P54652 639 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 FCHO2Q0JRZ9 810 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 CIAPIN1Q6FI81 312 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 INTS9Q9NV88 658 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 DIS3Q9Y2L1 958 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 HSPD1P10809 573 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 SLC12A1Q13621 1099 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 GTF2H3Q13889 308 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 GCOM2Q9BZD3 368 aaPredicted RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 E7EWF7 191 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 GNB5O14775 395 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 P4HA2O15460 535 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 LRPAP1P30533 357 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 ST8SIA6P61647 398 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 KRT77Q7Z794 578 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 SLC26A7Q8TE54 656 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 THRAP3Q9Y2W1 955 aaKnown RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 ARL2BPQ9Y2Y0 163 aa14.1□□□□□ -0.15
PRDM16-201ENST00000270722 COL17A1Q9UMD9 1497 aaPredicted RBP14.1□□□□□ -0.15
PRDM16-201ENST00000270722 RPN1P04843 607 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 MSR1P21757 451 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 CATSPER2Q96P56 530 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 RHOT2Q8IXI1 618 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 RBM41Q96IZ5 413 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 LSM7Q9UK45 103 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 TNKSO95271 1327 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 APOA4P06727 396 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 TBC1D9BQ66K14 1250 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 ANO5Q75V66 913 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 PDCD10Q9BUL8 212 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 FAM25AB3EWG3 89 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 FAM25CB3EWG5 89 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 FAM25GB3EWG6 89 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 ARPC4P59998 168 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 CAV1Q03135 178 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 TWF2Q6IBS0 349 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 RNASE11Q8TAA1 199 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 DDX56Q9NY93 547 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 L3MBTL1Q9Y468 752 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 E7ENQ6 273 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 RALAP11233 206 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 ARPP19P56211 112 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 DNAJC10Q8IXB1 793 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 CAAP1Q9H8G2 361 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 NDUFA13Q9P0J0 144 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
PRDM16-201ENST00000270722 SENP1Q9P0U3 644 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 MYO9BQ13459 2157 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 CMA1P23946 247 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 SNX5Q9Y5X3 404 aa14.09□□□□□ -0.15
PRDM16-201ENST00000270722 FOSL2P15408 326 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 TBL3Q12788 808 aaKnown RBP14.08□□□□□ -0.15
PRDM16-201ENST00000270722 MIGA2Q7L4E1 593 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 SCFD1Q8WVM8 642 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 A0A0B4J269 797 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 TADA3O75528 432 aa14.08□□□□□ -0.15
PRDM16-201ENST00000270722 CIAO1O76071 339 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms