RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CCDC25Q86WR0 208 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 SLFN12Q8IYM2 578 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 SCFD2Q8WU76 684 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 SELENOSQ9BQE4 189 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 TMBIM4Q9HC24 238 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 DNAJC17Q9NVM6 304 aaKnown RBP9.92□□□□□ -0.82
MSH4-201ENST00000263187 WRAP73Q9P2S5 460 aaPredicted RBP9.92□□□□□ -0.82
MSH4-201ENST00000263187 RNF14Q9UBS8 474 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 GGT7Q9UJ14 662 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 COL24A1Q17RW2 1714 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 CRY2Q49AN0 593 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 CCDC38Q502W7 563 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 ODR4Q5SWX8 454 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 NT5DC3Q86UY8 548 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 KAT5Q92993 513 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 CD248Q9HCU0 757 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 AMFRQ9UKV5 643 aa9.92□□□□□ -0.82
MSH4-201ENST00000263187 MYH4Q9Y623 1939 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 A0A1W2PRG0 241 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 FOXN3O00409 490 aaPredicted RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 EXOC3O60645 756 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 IFNAR2P48551 515 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 RRP1BQ14684 758 aaKnown RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 DCAF12L1Q5VU92 463 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 CTNNBL1Q8WYA6 563 aaPredicted RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 C18orf8Q96DM3 657 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 TYW1Q9NV66 732 aaKnown RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 PNMA2Q9UL42 364 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 TNFAIP3P21580 790 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 HSPA9P38646 679 aaKnown RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 KCNJ1P48048 391 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 ACTN3Q08043 901 aaPredicted RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 HYIQ5T013 277 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 LRCH2Q5VUJ6 765 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 NSMFQ6X4W1 530 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 ALG3Q92685 438 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 KRT35Q92764 455 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 CYFIP2Q96F07 1278 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 WDR18Q9BV38 432 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 EFCC1Q9HA90 598 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 MLXIPLQ9NP71 852 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 SWAP70Q9UH65 585 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 TMEM59LQ9UK28 342 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 COG5Q9UP83 839 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 TRAF3IP3Q9Y228 551 aa9.91□□□□□ -0.82
MSH4-201ENST00000263187 UTP11Q9Y3A2 253 aaKnown RBP9.91□□□□□ -0.82
MSH4-201ENST00000263187 GOLGA6L7A0A1B0GV03 622 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 CLRN2A0PK11 232 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 PDXKO00764 312 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 OPLAHO14841 1288 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 PLSCR1O15162 318 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 CAND2O75155 1236 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 TRIM37O94972 964 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.82
MSH4-201ENST00000263187 TNFRSF8P28908 595 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 GCLMP48507 274 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 MESDQ14696 234 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 ABCB5Q2M3G0 1257 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 B4GALNT4Q76KP1 1039 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 ACER1Q8TDN7 264 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 PBKQ96KB5 322 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 JPH2Q9BR39 696 aaPredicted RBP9.9□□□□□ -0.82
MSH4-201ENST00000263187 UBE2TQ9NPD8 197 aaPredicted RBP9.9□□□□□ -0.82
MSH4-201ENST00000263187 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 TCP10L2B9ZVM9 353 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 F8VZ95 297 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 H0YGN5 161 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 SLITRK3O94933 977 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 GUCY2CP25092 1073 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.82
MSH4-201ENST00000263187 C2CD6Q53TS8 623 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 KIAA1755Q5JYT7 1200 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 SYDE2Q5VT97 1194 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 CPLX4Q7Z7G2 160 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 MGARPQ8TDB4 240 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 POP1Q99575 1024 aaKnown RBP9.9□□□□□ -0.82
MSH4-201ENST00000263187 COA1Q9GZY4 146 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 NFS1Q9Y697 457 aa9.9□□□□□ -0.82
MSH4-201ENST00000263187 MYO3BQ8WXR4 1341 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 TCRBV7S2A1N4TA0A589 114 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 FRMD3A2A2Y4 597 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 HMGB1P1B2RPK0 211 aaPredicted RBP9.9□□□□□ -0.83
MSH4-201ENST00000263187 SORBS3O60504 671 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 CLSTN1O94985 981 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 ARP10275 920 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 FGFR4P22455 802 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 SOX5P35711 763 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 PSMC2P35998 433 aaKnown RBP9.9□□□□□ -0.83
MSH4-201ENST00000263187 FMO5P49326 533 aa9.9□□□□□ -0.83
MSH4-201ENST00000263187 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms