RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 ORC4O43929 436 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 AGTP01019 485 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 IFNB1P01574 187 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 GGA2Q9UJY4 613 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 PCDHGA3Q9Y5H0 932 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 F8VZ95 297 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 PALMO75781 387 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 NPTXRO95502 500 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 C21orf59P57076 290 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 NDUFA5Q16718 116 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 MTHFSDQ2M296 383 aaKnown RBP11.39□□□□□ -0.59
KPNA3-201ENST00000261667 IYDQ6PHW0 289 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 SEPT8Q92599 483 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 MRPL1Q9BYD6 325 aaKnown RBP11.39□□□□□ -0.59
KPNA3-201ENST00000261667 SNX25Q9H3E2 840 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 LMCD1Q9NZU5 365 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
KPNA3-201ENST00000261667 RGPD2P0DJD1 1756 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 KCNJ2P63252 427 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CCDC89Q8N998 374 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 THTPAQ9BU02 230 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 NOL6Q9H6R4 1146 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 HBS1LQ9Y450 684 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 GOLGA8TH3BQL2 631 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CYP11B2P19099 503 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CDC25AP30304 524 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 KDSRQ06136 332 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 HIC1Q14526 733 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 GEN1Q17RS7 908 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CCDC103Q8IW40 242 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 SCUBE1Q8IWY4 988 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 MMGT1Q8N4V1 131 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 LPIN2Q92539 896 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 TSPAN18Q96SJ8 248 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 SEC63Q9UGP8 760 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 ARMCX3Q9UH62 379 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 TELO2Q9Y4R8 837 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 COL18A1P39060 1754 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 XPOTO43592 962 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 SEC24DO94855 1032 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 NCF2P19878 526 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 SP100P23497 879 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 PRAMEP78395 509 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 IFIT1BQ5T764 474 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 ELMSAN1Q6PJG2 1045 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CDH24Q86UP0 819 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
KPNA3-201ENST00000261667 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 DCUN1D5Q9BTE7 237 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
KPNA3-201ENST00000261667 COQ9O75208 318 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TTC4O95801 387 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 HMOX2P30519 316 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 MARK2Q7KZI7 788 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 CHP1Q99653 195 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 RIC8AQ9NPQ8 531 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 LRP2BPQ9P2M1 347 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 FGGP02679 453 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 MSL3P1P0C860 447 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TUBA3CQ13748 450 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 PPP2R3CQ969Q6 453 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TMED5Q9Y3A6 229 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TRIM17Q9Y577 477 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 PPP6R2O75170 966 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 SEMA3DO95025 777 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TFRCP02786 760 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 VAV1P15498 845 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 CDH3P22223 829 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 XRCC4Q13426 336 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 LPCAT2Q7L5N7 544 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 GALNT4Q8N4A0 578 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 SDCCAG3Q96C92 435 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 MS4A14Q96JA4 679 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 CNOT6LQ96LI5 555 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms